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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   CPI   cyclopropyl isomerase 
 sly-r.6   CPI   cyclopropyl isomerase 
 sly-m.5   CPI   cyclopropyl isomerase 
 sot-r.1   102603067   cycloeucalenol cycloisomerase 
 nta-r.1   107797131   cycloeucalenol cycloisomerase-like 
 nta-r.1   107802648   cycloeucalenol cycloisomerase 
 ath-u.5   CPI1   cyclopropyl isomerase 
 gma-u.5   100780309   cycloeucalenol cycloisomerase 
 gma-u.5   100777966   cycloeucalenol cycloisomerase 
 bra-r.6   103842220   cycloeucalenol cycloisomerase 
 bra-r.6   103858451   cycloeucalenol cycloisomerase 
 vvi-u.5   100262783   cycloeucalenol cycloisomerase 
 ppo-u.5   7454702   cycloeucalenol cycloisomerase 
 mtr-u.5   11427814   cycloeucalenol cycloisomerase 
 ghi-r.1   121232048   cycloeucalenol cycloisomerase 
 ghi-r.1   107941049   cycloeucalenol cycloisomerase 
 bna-r.1   106388470   cycloeucalenol cycloisomerase-like 
 bna-r.1   106388428   cycloeucalenol cycloisomerase 
 bna-r.1   106368587   cycloeucalenol cycloisomerase-like 
 cit-r.1   102630846   cycloeucalenol cycloisomerase 
 osa-u.5   9270960   cycloeucalenol cycloisomerase 
 zma-u.5   100283632   cycloeucalenol cycloisomerase 
 tae-r.2   123145824   cycloeucalenol cycloisomerase 
 tae-r.2   123091100   cycloeucalenol cycloisomerase 
 tae-r.2   123096100   cycloeucalenol cycloisomerase 
 hvu-r.1   123447753   cycloeucalenol cycloisomerase-like 
 hvu-r.1   123453115   cycloeucalenol cycloisomerase-like 
 sbi-r.1   8071249   cycloeucalenol cycloisomerase 
 sbi-r.1   8071275   cycloeucalenol cycloisomerase 
 bdi-r.1   100834141   cycloeucalenol cycloisomerase 
 cre-r.1   CHLRE_16g657300v5   uncharacterized protein 

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Top 50 coexpressed genes to CPI (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CPI (sly-u.5 coexpression data)

CoexMap"100301930"


slyCPI | Entrez gene ID : 100301930    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 3 1 2 1 2 2 1 1 1 2 3 1 1 1 3 2 2 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly00100 [list] [network] Steroid biosynthesis (38 genes)
GO BP
GO CC
GO MF
GO:0047793 [list] [network] cycloeucalenol cycloisomerase activity  (1 genes)  IEA  
Protein NP_001234239.2 [sequence] [blastp]
XP_019066806.1 [sequence] [blastp]
XP_069147903.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  cyto_plas 3,  E.R. 2,  golg 1,  E.R._vacu 1  (predict for NP_001234239.2)
plas 4,  cyto_plas 3,  E.R. 2,  golg 1,  E.R._vacu 1  (predict for XP_019066806.1)
cyto 5,  vacu 1,  pero 1,  mito 1,  plas 1,  E.R. 1,  E.R._plas 1,  mito_plas 1  (predict for XP_069147903.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for NP_001234239.2)
other 6,  scret 4  (predict for XP_019066806.1)
mito 6,  other 6  (predict for XP_069147903.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
CPI
sly-r.6
for
CPI
sly-m.5
for
CPI
sot-r.1
for
102603067
nta-r.1
for
107797131
nta-r.1
for
107802648
ath-u.5
for
CPI1
gma-u.5
for
100780309
gma-u.5
for
100777966
bra-r.6
for
103842220
bra-r.6
for
103858451
vvi-u.5
for
100262783
ppo-u.5
for
7454702
mtr-u.5
for
11427814
ghi-r.1
for
121232048
ghi-r.1
for
107941049
bna-r.1
for
106388470
bna-r.1
for
106388428
bna-r.1
for
106368587
cit-r.1
for
102630846
osa-u.5
for
9270960
zma-u.5
for
100283632
tae-r.2
for
123145824
tae-r.2
for
123091100
tae-r.2
for
123096100
hvu-r.1
for
123447753
hvu-r.1
for
123453115
sbi-r.1
for
8071249
sbi-r.1
for
8071275
bdi-r.1
for
100834141
cre-r.1
for
CHLRE_16g657300v5


Ortholog ID: 6371
Species sly sot nta nta ath gma gma bra bra vvi ppo mtr ghi ghi bna bna bna cit osa zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol CPI LOC102603067 LOC107797131 LOC107802648 CPI1 LOC100780309 LOC100777966 LOC103842220 LOC103858451 LOC100262783 LOC7454702 LOC11427814 LOC121232048 LOC107941049 LOC106388428 LOC106368587 LOC106395079 LOC102630846 LOC9270960 LOC100283632 LOC123096100 LOC123086881 LOC123134769 LOC123447753 LOC123453115 LOC8071249 LOC8071275 LOC100834141 CHLRE_16g657300v5
Function* cyclopropyl isomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase-like cycloeucalenol cycloisomerase cyclopropyl isomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase-like cycloeucalenol cycloisomerase-like cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase-like cycloeucalenol cycloisomerase-like cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase cycloeucalenol cycloisomerase uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 5
sly00280 Valine, leucine and isoleucine degradation 2
sly00650 Butanoate metabolism 2
sly00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00100 Steroid biosynthesis 5
sot00480 Glutathione metabolism 2
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
nta00230 Purine metabolism 2
nta00920 Sulfur metabolism 2
nta01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 5
ath00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 5
bra00640 Propanoate metabolism 3
bra01200 Carbon metabolism 3
bra00410 beta-Alanine metabolism 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00010 Glycolysis / Gluconeogenesis 7
ppo01200 Carbon metabolism 6
ppo01230 Biosynthesis of amino acids 6
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04814 Motor proteins 3
mtr00010 Glycolysis / Gluconeogenesis 2
mtr04144 Endocytosis 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 9
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 8
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00670 One carbon pool by folate 2
zma00230 Purine metabolism 2
zma00730 Thiamine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 2
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03010 Ribosome 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 2
sbi03410 Base excision repair 2
sbi03420 Nucleotide excision repair 2
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 3
cre04120 Ubiquitin mediated proteolysis 3
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100301930 102603067 107797131 107802648 835105 100780309 100777966 103842220 103858451 100262783 7454702 11427814 121232048 107941049 106388428 106368587 106395079 102630846 9270960 100283632 123096100 123086881 123134769 123447753 123453115 8071249 8071275 100834141 5723465
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