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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  101243757  large ribosomal subunit protein uL23 
 sly-r.6  101243757  large ribosomal subunit protein uL23 
 sot-r.1  102585355  60S ribosomal protein L23a-like 
 nta-r.1  107831240  large ribosomal subunit protein uL23 

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Top 50 coexpressed genes to 101243757 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101243757 (sly-u.5 coexpression data)

CoexMap"101243757"


slyLOC101243757 | Entrez gene ID : 101243757
Species sly sot nta osa cit ath bna ppo ghi bdi sbi gma mtr bra tae hvu vvi zma cre
Paralog 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (27 genes)  IEA  
GO:0006412 [list] [network] translation  (492 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (140 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
Protein XP_004231945.1 [sequence] [blastp]
XP_010316033.1 [sequence] [blastp]
XP_025885487.1 [sequence] [blastp]
XP_025885488.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1  (predict for XP_004231945.1)
cyto 3,  extr 3,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_010316033.1)
chlo 9,  nucl 1  (predict for XP_025885487.1)
chlo 9,  nucl 1  (predict for XP_025885488.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_004231945.1)
other 8  (predict for XP_010316033.1)
chlo 7  (predict for XP_025885487.1)
chlo 7  (predict for XP_025885488.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
101243757


sly-r.6
for
101243757


sot-r.1
for
102585355


nta-r.1
for
107831240



Ortholog ID: 28726
Species sly sot nta
Symbol LOC101243757 LOC102585355 LOC107831240
Function* large ribosomal subunit protein uL23 60S ribosomal protein L23a-like large ribosomal subunit protein uL23
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101243757 102585355 107831240
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