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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101245685   uncharacterized LOC101245685 
 sly-r.6   101245685   uncharacterized LOC101245685 
 sot-r.1   102590127   serine/arginine repetitive matrix protein 2 
 nta-r.1   107828793   uncharacterized LOC107828793 
 nta-r.1   107782600   pre-mRNA-splicing factor cwc-21-like 
 nta-r.1   107769304   uncharacterized LOC107769304 
 ath-u.5   AT3G49601   pre-mRNA-splicing factor 
 gma-u.5   100792927   protein starmaker 
 gma-u.5   100812351   nipped-B-like protein B 
 gma-u.5   100813358   protein starmaker 
 bra-r.6   103873043   pre-mRNA-splicing factor cwc-21 
 vvi-u.5   100256073   uncharacterized LOC100256073 
 ppo-u.5   7470720   uncharacterized LOC7470720 
 mtr-u.5   25481896   protein starmaker 
 ghi-r.1   107955360   protein starmaker 
 ghi-r.1   107923866   serine/arginine repetitive matrix protein 2 
 ghi-r.1   121218610   pre-mRNA-splicing factor cwc-21 
 bna-r.1   106418282   pre-mRNA-splicing factor cwc-21 
 bna-r.1   106347411   pre-mRNA-splicing factor cwc-21-like 
 cit-r.1   102613072   uncharacterized LOC102613072 
 zma-u.5   103654771   pre-mRNA-splicing factor CWC21 
 zma-u.5   103654772   pre-mRNA-splicing factor CWC21 
 zma-u.5   103654766   pre-mRNA-splicing factor CWC21 
 tae-r.2   123114076   pre-mRNA-splicing factor CWC21 
 tae-r.2   123046503   protein starmaker 
 tae-r.2   123190237   protein starmaker 
 hvu-r.1   123427665   serine/arginine repetitive matrix protein 2-like 
 sbi-r.1   8082223   pre-mRNA-splicing factor CWC21 
 bdi-r.1   100822512   protein starmaker 
 bdi-r.1   100832156   pre-mRNA-splicing factor CWC21 
 cre-r.1   CHLRE_09g409200v5   uncharacterized protein 

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Top 50 coexpressed genes to 101245685 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101245685 (sly-u.5 coexpression data)

CoexMap"101245685"


slyLOC101245685 | Entrez gene ID : 101245685      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit zma tae hvu sbi bdi cre osa
Paralog 2 1 3 1 3 1 1 1 1 3 2 1 3 3 1 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
Protein XP_004246069.2 [sequence] [blastp]
XP_010325658.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_004246069.2)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_010325658.2)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_004246069.2)
other 7,  mito 3  (predict for XP_010325658.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101245685
sly-r.6
for
101245685
sot-r.1
for
102590127
nta-r.1
for
107828793
nta-r.1
for
107782600
nta-r.1
for
107769304
ath-u.5
for
AT3G49601
gma-u.5
for
100792927
gma-u.5
for
100812351
gma-u.5
for
100813358
bra-r.6
for
103873043
vvi-u.5
for
100256073
ppo-u.5
for
7470720
mtr-u.5
for
25481896
ghi-r.1
for
107955360
ghi-r.1
for
107923866
ghi-r.1
for
121218610
bna-r.1
for
106418282
bna-r.1
for
106347411
cit-r.1
for
102613072
zma-u.5
for
103654771
zma-u.5
for
103654772
zma-u.5
for
103654766
tae-r.2
for
123114076
tae-r.2
for
123046503
tae-r.2
for
123190237
hvu-r.1
for
123427665
sbi-r.1
for
8082223
bdi-r.1
for
100822512
bdi-r.1
for
100832156
cre-r.1
for
CHLRE_09g409200v5


Ortholog ID: 4160
Species sly sot nta nta nta ath gma gma gma bra vvi ppo mtr ghi ghi ghi bna bna cit zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC101245685 LOC102590127 LOC107828793 LOC107782600 LOC107769304 AT3G49601 LOC100792927 LOC100812351 LOC100813358 LOC103873043 LOC100256073 LOC7470720 LOC25481896 LOC107923866 LOC121218610 LOC107956862 LOC106418282 LOC106347411 LOC102613072 LOC103654761 LOC100278881 LOC123114076 LOC123046503 LOC123054360 LOC123427665 LOC8082223 LOC100822512 LOC100832156 CHLRE_09g409200v5
Function* uncharacterized LOC101245685 serine/arginine repetitive matrix protein 2 uncharacterized LOC107828793 pre-mRNA-splicing factor cwc-21-like uncharacterized LOC107769304 pre-mRNA-splicing factor protein starmaker nipped-B-like protein B protein starmaker pre-mRNA-splicing factor cwc-21 uncharacterized LOC100256073 uncharacterized LOC7470720 protein starmaker serine/arginine repetitive matrix protein 2 pre-mRNA-splicing factor cwc-21 pre-mRNA-splicing factor CWC21-like pre-mRNA-splicing factor cwc-21 pre-mRNA-splicing factor cwc-21-like uncharacterized LOC102613072 protein starmaker Cwf21 pre-mRNA-splicing factor CWC21 protein starmaker glutamic acid-rich protein serine/arginine repetitive matrix protein 2-like pre-mRNA-splicing factor CWC21 protein starmaker pre-mRNA-splicing factor CWC21 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03015 mRNA surveillance pathway 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre03020 RNA polymerase 2
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101245685 102590127 107828793 107782600 107769304 6241216 100792927 100812351 100813358 103873043 100256073 7470720 25481896 107923866 121218610 107956862 106418282 106347411 102613072 103654761 100278881 123114076 123046503 123054360 123427665 8082223 100822512 100832156 5722255
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