Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101247490   pentatricopeptide repeat-containing protein At3g14330 
 sly-r.6   101247490   pentatricopeptide repeat-containing protein At3g14330 
 sot-r.1   102580636   pentatricopeptide repeat-containing protein At3g14330 
 nta-r.1   107769570   pentatricopeptide repeat-containing protein At3g14330-like 
 ath-u.5   AT3G14330   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100795030   pentatricopeptide repeat-containing protein At3g14330 
 bra-r.6   103842113   pentatricopeptide repeat-containing protein At3g14330 
 vvi-u.5   100257990   pentatricopeptide repeat-containing protein At3g14330 
 bna-r.1   106348831   pentatricopeptide repeat-containing protein At3g14330-like 
 bna-r.1   106367771   pentatricopeptide repeat-containing protein At3g14330-like 

close


Top 50 coexpressed genes to 101247490 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 101247490 (sly-u.5 coexpression data)

CoexMap"101247490"


slyLOC101247490 | Entrez gene ID : 101247490      
Species sly sot nta ath gma bra vvi bna cre ppo hvu mtr tae bdi osa zma cit ghi sbi
Paralog 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004250548.2 [sequence] [blastp]
XP_069147794.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_004250548.2)
chlo 4,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_069147794.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004250548.2)
chlo 9  (predict for XP_069147794.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101247490
sly-r.6
for
101247490
sot-r.1
for
102580636
nta-r.1
for
107769570
ath-u.5
for
AT3G14330
gma-u.5
for
100795030
bra-r.6
for
103842113
vvi-u.5
for
100257990
bna-r.1
for
106348831
bna-r.1
for
106367771


Ortholog ID: 15197
Species sly sot nta ath gma bra vvi bna bna
Symbol LOC101247490 LOC102580636 LOC107769570 AT3G14330 LOC100795030 LOC103842113 LOC100257990 LOC106348831 LOC106367771
Function* pentatricopeptide repeat-containing protein At3g14330 pentatricopeptide repeat-containing protein At3g14330 pentatricopeptide repeat-containing protein At3g14330-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g14330 pentatricopeptide repeat-containing protein At3g14330 pentatricopeptide repeat-containing protein At3g14330 pentatricopeptide repeat-containing protein At3g14330-like pentatricopeptide repeat-containing protein At3g14330-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 5
nta04141 Protein processing in endoplasmic reticulum 4
nta04626 Plant-pathogen interaction 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00330 Arginine and proline metabolism 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
bna04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101247490 102580636 107769570 820653 100795030 103842113 100257990 106348831 106367771
The preparation time of this page was 0.1 [sec].