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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101248069   transcription initiation factor TFIID subunit 13 
 sly-r.6   101248069   transcription initiation factor TFIID subunit 13 
 sly-u.5   101247489   transcription initiation factor TFIID subunit 13 
 ath-u.5   TAF13   TBP-associated factor 13 
 gma-u.5   100796504   transcription initiation factor TFIID subunit 13-like 
 gma-u.5   100789657   transcription initiation factor TFIID subunit 13 
 gma-u.5   100786463   transcription initiation factor TFIID subunit 13-like 
 vvi-u.5   100246965   transcription initiation factor TFIID subunit 13 
 ppo-u.5   7495223   transcription initiation factor TFIID subunit 13 
 mtr-u.5   11427653   transcription initiation factor TFIID subunit 13 
 osa-u.5   9268703   transcription initiation factor TFIID subunit 13 
 zma-u.5   100282526   uncharacterized LOC100282526 

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Top 50 coexpressed genes to 101248069 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101248069 (sly-u.5 coexpression data)

CoexMap"101248069"


slyLOC101248069 | Entrez gene ID : 101248069    
Species sly ath gma vvi ppo mtr osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 3 1 3 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03022 [list] [network] Basal transcription factors (39 genes)
GO BP
GO:0006366 [list] [network] transcription by RNA polymerase II  (63 genes)  IEA  
GO CC
GO MF
GO:0046982 [list] [network] protein heterodimerization activity  (125 genes)  IEA  
Protein XP_004232870.1 [sequence] [blastp]
XP_010316745.1 [sequence] [blastp]
XP_010316747.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_004232870.1)
nucl 7,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  chlo_mito 1,  mito_plas 1  (predict for XP_010316745.1)
nucl 7,  cyto_nucl 4,  chlo 1  (predict for XP_010316747.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_004232870.1)
chlo 5  (predict for XP_010316745.1)
chlo 6  (predict for XP_010316747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101248069

.
sly-r.6
for
101248069

.
sly-u.5
for
101247489

.
ath-u.5
for
TAF13

.
gma-u.5
for
100796504

.
gma-u.5
for
100789657

.
gma-u.5
for
100786463

.
vvi-u.5
for
100246965

.
ppo-u.5
for
7495223

.
mtr-u.5
for
11427653

.
osa-u.5
for
9268703

.
zma-u.5
for
100282526

.


Ortholog ID: 5883
Species ath gma gma sly sly osa zma bra bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sot sot cit cit bdi nta nta
Symbol TAF13 LOC100786463 LOC100796504 LOC101247489 LOC101248069 LOC9268703 LOC100282526 LOC103844568 LOC103836646 LOC100246965 LOC7495223 LOC11427653 LOC123180620 LOC123103185 LOC123426387 LOC107926408 LOC106401839 LOC106422944 CHLRE_04g222100v5 LOC8086326 LOC102594323 LOC102583468 LOC102628248 LOC102607810 LOC100824647 LOC107829799 LOC107771623
Function* TBP-associated factor 13 transcription initiation factor TFIID subunit 13-like transcription initiation factor TFIID subunit 13-like transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 uncharacterized LOC100282526 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13-like uncharacterized protein transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13-like transcription initiation factor TFIID subunit 13-like transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13-like transcription initiation protein SPT3 homolog transcription initiation factor TFIID subunit 13 transcription initiation factor TFIID subunit 13
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 4
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma04130 SNARE interactions in vesicular transport 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi03010 Ribosome 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03040 Spliceosome 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 5
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03018 RNA degradation 3
ghi04142 Lysosome 2
ghi03022 Basal transcription factors 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna04122 Sulfur relay system 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 7
sot03008 Ribosome biogenesis in eukaryotes 2
sot03083 Polycomb repressive complex 2
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 3
cit03022 Basal transcription factors 3
cit04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 4
cit04136 Autophagy - other 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03010 Ribosome 3
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03010 Ribosome 2
nta03022 Basal transcription factors 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837962 100786463 100796504 101247489 101248069 9268703 100282526 103844568 103836646 100246965 7495223 11427653 123180620 123103185 123426387 107926408 106401839 106422944 5717760 8086326 102594323 102583468 102628248 102607810 100824647 107829799 107771623
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