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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101252548   protein AUXIN SIGNALING F-BOX 2 
 sly-r.6   101252548   protein AUXIN SIGNALING F-BOX 2 
 sot-r.1   102595865   protein TRANSPORT INHIBITOR RESPONSE 1-like 
 nta-r.1   107769845   protein TRANSPORT INHIBITOR RESPONSE 1-like 
 nta-r.1   107821218   protein TRANSPORT INHIBITOR RESPONSE 1 
 gma-u.5   100788342   protein TRANSPORT INHIBITOR RESPONSE 1 
 gma-u.5   100808522   protein TRANSPORT INHIBITOR RESPONSE 1 
 vvi-u.5   100263734   protein TRANSPORT INHIBITOR RESPONSE 1 
 ppo-u.5   7485598   protein TRANSPORT INHIBITOR RESPONSE 1 
 ppo-u.5   7494337   protein TRANSPORT INHIBITOR RESPONSE 1 
 mtr-u.5   11430500   transport inhibitor response 1-like protein Os04g0395600 
 mtr-u.5   25502078   protein TRANSPORT INHIBITOR RESPONSE 1 
 ghi-r.1   107925195   transport inhibitor response 1-like protein Os04g0395600 
 ghi-r.1   121222293   protein TRANSPORT INHIBITOR RESPONSE 1 
 cit-r.1   102629995   protein TRANSPORT INHIBITOR RESPONSE 1-like 
 cit-r.1   102630291   protein TRANSPORT INHIBITOR RESPONSE 1 

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Top 50 coexpressed genes to 101252548 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101252548 (sly-u.5 coexpression data)

CoexMap"101252548"


slyLOC101252548 | Entrez gene ID : 101252548    
Species sly sot nta gma vvi ppo mtr ghi cit cre bra ath hvu bna tae bdi osa zma sbi
Paralog 2 1 2 2 1 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04075 [list] [network] Plant hormone signal transduction (437 genes)
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (51 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (43 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004232795.1 [sequence] [blastp]
XP_010316671.1 [sequence] [blastp]
XP_010316673.1 [sequence] [blastp]
XP_010316674.1 [sequence] [blastp]
XP_025885184.1 [sequence] [blastp]
XP_069149794.1 [sequence] [blastp]
XP_069149795.1 [sequence] [blastp]
XP_069149796.1 [sequence] [blastp]
XP_069149797.1 [sequence] [blastp]
XP_069149799.1 [sequence] [blastp]
XP_069149800.1 [sequence] [blastp]
XP_069149801.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_004232795.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_010316671.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_010316673.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_010316674.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_025885184.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_069149794.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_069149795.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_069149796.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_069149797.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_069149799.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_069149800.1)
nucl 6,  cyto_nucl 4,  cyto 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_069149801.1)
Subcellular
localization
TargetP
other 7  (predict for XP_004232795.1)
other 7  (predict for XP_010316671.1)
other 7  (predict for XP_010316673.1)
other 7  (predict for XP_010316674.1)
other 7  (predict for XP_025885184.1)
other 7  (predict for XP_069149794.1)
other 7  (predict for XP_069149795.1)
other 7  (predict for XP_069149796.1)
other 7  (predict for XP_069149797.1)
other 7  (predict for XP_069149799.1)
other 7  (predict for XP_069149800.1)
other 7  (predict for XP_069149801.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101252548
sly-r.6
for
101252548
sot-r.1
for
102595865
nta-r.1
for
107769845
nta-r.1
for
107821218
gma-u.5
for
100788342
gma-u.5
for
100808522
vvi-u.5
for
100263734
ppo-u.5
for
7485598
ppo-u.5
for
7494337
mtr-u.5
for
11430500
mtr-u.5
for
25502078
ghi-r.1
for
107925195
ghi-r.1
for
121222293
cit-r.1
for
102629995
cit-r.1
for
102630291


Ortholog ID: 13618
Species sly sot nta nta gma gma vvi ppo ppo mtr mtr ghi ghi cit cit
Symbol LOC101252548 LOC102595865 LOC107769845 LOC107821218 LOC100788342 LOC100808522 LOC100263734 LOC7485598 LOC7494337 LOC11430500 LOC25502078 LOC107925195 LOC121222293 LOC102629995 LOC102630291
Function* protein AUXIN SIGNALING F-BOX 2 protein TRANSPORT INHIBITOR RESPONSE 1-like protein TRANSPORT INHIBITOR RESPONSE 1-like protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1 transport inhibitor response 1-like protein Os04g0395600 protein TRANSPORT INHIBITOR RESPONSE 1 transport inhibitor response 1-like protein Os04g0395600 protein TRANSPORT INHIBITOR RESPONSE 1 protein TRANSPORT INHIBITOR RESPONSE 1-like protein TRANSPORT INHIBITOR RESPONSE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 4
mtr00010 Glycolysis / Gluconeogenesis 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit04145 Phagosome 2
cit04517 IgSF CAM signaling 2
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101252548 102595865 107769845 107821218 100788342 100808522 100263734 7485598 7494337 11430500 25502078 107925195 121222293 102629995 102630291
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