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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101253825   uncharacterized LOC101253825 
 sly-r.6   101253825   uncharacterized LOC101253825 
 ath-u.5   AT1G04945   HIT-type Zinc finger family protein 
 gma-u.5   100801258   box C/D snoRNA protein 1 
 gma-u.5   100785007   box C/D snoRNA protein 1 
 vvi-u.5   100254449   box C/D snoRNA protein 1-like 
 ppo-u.5   18094974   putative box C/D snoRNA protein SPCC613.07 
 mtr-u.5   25497155   box C/D snoRNA protein 1 
 osa-u.5   4324552   putative box C/D snoRNA protein SPCC613.07 
 zma-u.5   103650705   uncharacterized LOC103650705 

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Top 50 coexpressed genes to 101253825 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101253825 (sly-u.5 coexpression data)

CoexMap"101253825"


slyLOC101253825 | Entrez gene ID : 101253825      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048254 [list] [network] snoRNA localization  (2 genes)  IEA  
GO:0000492 [list] [network] box C/D snoRNP assembly  (7 genes)  IEA  
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (21 genes)  IEA  
GO CC
GO:0070761 [list] [network] pre-snoRNP complex  (2 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO MF
Protein XP_004229358.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_004229358.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_004229358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101253825

.
sly-r.6
for
101253825

.
ath-u.5
for
AT1G04945

.
gma-u.5
for
100801258

.
gma-u.5
for
100785007

.
vvi-u.5
for
100254449

.
ppo-u.5
for
18094974

.
mtr-u.5
for
25497155

.
osa-u.5
for
4324552

.
zma-u.5
for
103650705

.


Ortholog ID: 5920
Species ath gma gma sly osa zma bra bra vvi vvi ppo mtr tae tae hvu ghi ghi cre sbi sot cit bdi nta nta
Symbol AT1G04945 LOC100785007 LOC100801258 LOC101253825 LOC4324552 LOC103650705 LOC103836546 LOC103871443 LOC100266130 LOC100855187 LOC18094974 LOC25497155 LOC123063555 LOC123080865 LOC123445609 LOC107900720 LOC107938478 CHLRE_01g049400v5 LOC8074108 LOC102602097 LOC102628447 LOC100824581 LOC107808517 LOC107770307
Function* HIT-type Zinc finger family protein box C/D snoRNA protein 1 box C/D snoRNA protein 1 uncharacterized LOC101253825 putative box C/D snoRNA protein SPCC613.07 uncharacterized LOC103650705 box C/D snoRNA protein 1 box C/D snoRNA protein 1 uncharacterized LOC100266130 uncharacterized LOC100855187 putative box C/D snoRNA protein SPCC613.07 box C/D snoRNA protein 1 putative box C/D snoRNA protein SPCC613.07 putative box C/D snoRNA protein SPCC613.07 putative box C/D snoRNA protein SPCC613.07 putative box C/D snoRNA protein SPCC613.07 putative box C/D snoRNA protein SPCC613.07 uncharacterized protein uncharacterized LOC8074108 box C/D snoRNA protein 1 uncharacterized LOC102628447 putative box C/D snoRNA protein SPCC613.07 uncharacterized LOC107808517 uncharacterized LOC107770307
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03013 Nucleocytoplasmic transport 2
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5007664 100785007 100801258 101253825 4324552 103650705 103836546 103871443 100266130 100855187 18094974 25497155 123063555 123080865 123445609 107900720 107938478 5715720 8074108 102602097 102628447 100824581 107808517 107770307
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