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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101254992   pentatricopeptide repeat-containing protein 
 sly-r.6   101254992   pentatricopeptide repeat-containing protein 
 sot-r.1   102580158   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 nta-r.1   107787296   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 nta-r.1   107785458   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 gma-u.5   100790756   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 bra-r.6   103830579   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 vvi-u.5   100264292   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 ppo-u.5   7467845   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 mtr-u.5   11440554   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 ghi-r.1   107951460   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 ghi-r.1   107910396   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 bna-r.1   106353491   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 bna-r.1   106386108   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 cit-r.1   102627920   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 osa-u.5   4334787   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 hvu-r.1   123399017   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 sbi-r.1   8070715   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 
 bdi-r.1   100833445   putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial 

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Top 50 coexpressed genes to 101254992 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101254992 (sly-u.5 coexpression data)

CoexMap"101254992"


slyLOC101254992 | Entrez gene ID : 101254992      
Species sly sot nta gma bra vvi ppo mtr ghi bna cit osa hvu sbi bdi cre tae ath zma
Paralog 2 1 2 1 1 1 1 1 2 2 1 1 1 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004237912.1 [sequence] [blastp]
XP_010320176.1 [sequence] [blastp]
XP_010320177.1 [sequence] [blastp]
XP_019069174.1 [sequence] [blastp]
XP_069153438.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_004237912.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_010320176.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_010320177.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_019069174.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_069153438.1)
Subcellular
localization
TargetP
other 6  (predict for XP_004237912.1)
other 6  (predict for XP_010320176.1)
other 6  (predict for XP_010320177.1)
other 6  (predict for XP_019069174.1)
other 6  (predict for XP_069153438.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101254992
sly-r.6
for
101254992
sot-r.1
for
102580158
nta-r.1
for
107787296
nta-r.1
for
107785458
gma-u.5
for
100790756
bra-r.6
for
103830579
vvi-u.5
for
100264292
ppo-u.5
for
7467845
mtr-u.5
for
11440554
ghi-r.1
for
107951460
ghi-r.1
for
107910396
bna-r.1
for
106353491
bna-r.1
for
106386108
cit-r.1
for
102627920
osa-u.5
for
4334787
hvu-r.1
for
123399017
sbi-r.1
for
8070715
bdi-r.1
for
100833445


Ortholog ID: 11808
Species sly sot nta nta gma bra vvi ppo mtr ghi ghi bna bna cit osa hvu sbi bdi
Symbol LOC101254992 LOC102580158 LOC107787296 LOC107785458 LOC100790756 LOC103830579 LOC100264292 LOC7467845 LOC11440554 LOC107951460 LOC107910396 LOC106353491 LOC106386108 LOC102627920 LOC4334787 LOC123399017 LOC8070715 LOC100833445
Function* pentatricopeptide repeat-containing protein putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 5
mtr00350 Tyrosine metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr01230 Biosynthesis of amino acids 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
sbi00020 Citrate cycle (TCA cycle) 2
sbi00620 Pyruvate metabolism 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 4
bdi01240 Biosynthesis of cofactors 3
bdi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101254992 102580158 107787296 107785458 100790756 103830579 100264292 7467845 11440554 107951460 107910396 106353491 106386108 102627920 4334787 123399017 8070715 100833445
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