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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   SSK3   SKP1-like protein 11-like 
 sly-r.6   SSK3   SKP1-like protein 11-like 
 sly-u.5   SSK2   SKP1-like protein 11-like 
 nta-r.1   107768666   SKP1-like protein 12 
 nta-r.1   107781710   SKP1-like protein 12 
 nta-r.1   107794082   SKP1-like protein 11 

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Top 50 coexpressed genes to SSK3 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SSK3 (sly-u.5 coexpression data)

CoexMap"101255553"


slySSK3 | Entrez gene ID : 101255553      
Species sly nta osa sot cit ath bna ppo ghi bdi sbi gma mtr bra tae hvu vvi zma cre
Paralog 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03083 [list] [network] Polycomb repressive complex (60 genes)
sly04120 [list] [network] Ubiquitin mediated proteolysis (151 genes)
sly04141 [list] [network] Protein processing in endoplasmic reticulum (216 genes)
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (51 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (24 genes)  IEA  
Protein NP_001288362.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  cyto_nucl 6,  extr 1,  E.R. 1  (predict for NP_001288362.1)
Subcellular
localization
TargetP
other 8,  scret 3  (predict for NP_001288362.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
SSK3
sly-r.6
for
SSK3
sly-u.5
for
SSK2
nta-r.1
for
107768666
nta-r.1
for
107781710
nta-r.1
for
107794082


Ortholog ID: 17905
Species sly sly nta nta nta
Symbol SSK3 SSK2 LOC107768666 LOC107781710 LOC107794082
Function* SKP1-like protein 11-like SKP1-like protein 11-like SKP1-like protein 12 SKP1-like protein 12 SKP1-like protein 11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
nta04120 Ubiquitin mediated proteolysis 4
nta04141 Protein processing in endoplasmic reticulum 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101255553 101255260 107768666 107781710 107794082
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