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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101257644   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 sly-r.6   101257644   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 sot-r.1   102595120   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 nta-r.1   107813516   pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like 
 nta-r.1   107777494   pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like 
 ath-u.5   AT4G32430   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103850943   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 mtr-u.5   11439884   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 ghi-r.1   107955071   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 ghi-r.1   107955653   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 bna-r.1   111203338   pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like 
 bna-r.1   106402017   pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like 
 cit-r.1   102618238   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 osa-u.5   4344238   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 
 bdi-r.1   100842291   pentatricopeptide repeat-containing protein At4g32430, mitochondrial 

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Top 50 coexpressed genes to 101257644 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101257644 (sly-u.5 coexpression data)

CoexMap"101257644"


slyLOC101257644 | Entrez gene ID : 101257644      
Species sly sot nta ath bra mtr ghi bna cit osa bdi sbi gma tae hvu ppo vvi zma cre
Paralog 2 1 2 1 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004253148.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  pero 1  (predict for XP_004253148.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_004253148.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101257644
sly-r.6
for
101257644
sot-r.1
for
102595120
nta-r.1
for
107813516
nta-r.1
for
107777494
ath-u.5
for
AT4G32430
bra-r.6
for
103850943
mtr-u.5
for
11439884
ghi-r.1
for
107955071
ghi-r.1
for
107955653
bna-r.1
for
111203338
bna-r.1
for
106402017
cit-r.1
for
102618238
osa-u.5
for
4344238
bdi-r.1
for
100842291


Ortholog ID: 12220
Species sly sot nta nta ath bra mtr ghi ghi bna bna cit osa bdi
Symbol LOC101257644 LOC102595120 LOC107813516 LOC107777494 AT4G32430 LOC103850943 LOC11439884 LOC107955071 LOC107955653 LOC111203338 LOC106402017 LOC102618238 LOC4344238 LOC100842291
Function* pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like pentatricopeptide repeat-containing protein At4g32430, mitochondrial-like pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial pentatricopeptide repeat-containing protein At4g32430, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
osa01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101257644 102595120 107813516 107777494 829378 103850943 11439884 107955071 107955653 111203338 106402017 102618238 4344238 100842291
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