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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101258616   pentatricopeptide repeat-containing protein At1g20230-like 
 sly-r.6   101258616   pentatricopeptide repeat-containing protein At1g20230-like 
 sot-r.1   102597064   pentatricopeptide repeat-containing protein At1g20230-like 
 nta-r.1   107766589   pentatricopeptide repeat-containing protein At1g20230-like 
 nta-r.1   107766590   pentatricopeptide repeat-containing protein At1g20230-like 
 gma-u.5   100785525   pentatricopeptide repeat-containing protein At1g20230 
 vvi-u.5   100853811   pentatricopeptide repeat-containing protein At1g20230 
 mtr-u.5   11435877   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 

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Top 50 coexpressed genes to 101258616 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101258616 (sly-u.5 coexpression data)

CoexMap"101258616"


slyLOC101258616 | Entrez gene ID : 101258616      
Species sly sot nta gma vvi mtr sbi osa cit bra tae ath bna hvu ppo ghi zma cre bdi
Paralog 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (280 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (5687 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010317151.1 [sequence] [blastp]
XP_019067752.1 [sequence] [blastp]
XP_025885044.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_010317151.1)
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_019067752.1)
chlo 6,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_025885044.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_010317151.1)
mito 5  (predict for XP_019067752.1)
mito 5  (predict for XP_025885044.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101258616
sly-r.6
for
101258616
sot-r.1
for
102597064
nta-r.1
for
107766589
nta-r.1
for
107766590
gma-u.5
for
100785525
vvi-u.5
for
100853811
mtr-u.5
for
11435877


Ortholog ID: 17779
Species sly sot nta nta gma vvi mtr
Symbol LOC101258616 LOC102597064 LOC107766589 LOC107766590 LOC100785525 LOC100853811 LOC11435877
Function* pentatricopeptide repeat-containing protein At1g20230-like pentatricopeptide repeat-containing protein At1g20230-like pentatricopeptide repeat-containing protein At1g20230-like pentatricopeptide repeat-containing protein At1g20230-like pentatricopeptide repeat-containing protein At1g20230 pentatricopeptide repeat-containing protein At1g20230 pentatricopeptide repeat-containing protein At3g24000, mitochondrial
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101258616 102597064 107766589 107766590 100785525 100853811 11435877
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