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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262004   large ribosomal subunit protein eL6 
 sly-r.6   101262004   large ribosomal subunit protein eL6 
 sly-m.5   101262004   large ribosomal subunit protein eL6 
 sly-u.5   101252946   large ribosomal subunit protein eL6 
 sly-u.5   101250600   large ribosomal subunit protein eL6 
 sot-r.1   102600468   60S ribosomal protein L6-like 
 sot-r.1   102601402   60S ribosomal protein L6-like 
 sot-r.1   102594318   60S ribosomal protein L6-like 
 nta-r.1   107803255   large ribosomal subunit protein eL6 
 nta-r.1   107794249   large ribosomal subunit protein eL6-like 
 nta-r.1   107786144   large ribosomal subunit protein eL6 
 ath-u.5   AT1G18540   Ribosomal protein L6 family protein 
 ath-u.5   AT1G74050   Ribosomal protein L6 family protein 
 ath-u.5   AT1G74060   Ribosomal protein L6 family protein 
 gma-u.5   100499766   uncharacterized LOC100499766 
 gma-u.5   100784101   60S ribosomal protein L6 
 gma-u.5   100500022   uncharacterized LOC100500022 
 bra-r.6   103842696   60S ribosomal protein L6-1 
 bra-r.6   103852878   60S ribosomal protein L6-3 
 bra-r.6   103872617   60S ribosomal protein L6-1 
 vvi-u.5   100257150   large ribosomal subunit protein eL6z 
 vvi-u.5   100252724   large ribosomal subunit protein eL6x 
 ppo-u.5   7454890   60S ribosomal protein L6 
 ppo-u.5   7480099   60S ribosomal protein L6 
 mtr-u.5   11445274   60S ribosomal protein L6 
 mtr-u.5   11423674   60S ribosomal protein L6 
 ghi-r.1   107949445   60S ribosomal protein L6-1 
 ghi-r.1   107950766   60S ribosomal protein L6-1 
 ghi-r.1   107948250   60S ribosomal protein L6 
 bna-r.1   106346911   60S ribosomal protein L6-1-like 
 bna-r.1   106354362   60S ribosomal protein L6-2 
 bna-r.1   106361993   60S ribosomal protein L6-1 
 cit-r.1   102608733   60S ribosomal protein L6-like 
 cit-r.1   102606973   60S ribosomal protein L6-like 
 osa-u.5   4329831   large ribosomal subunit protein eL6x 
 osa-u.5   4336140   large ribosomal subunit protein eL6x 
 zma-u.5   103627361   60S ribosomal protein L6-like 
 zma-u.5   100191612   60S ribosomal protein L6-like 
 zma-u.5   118476703   60S ribosomal protein L6-3-like 
 tae-r.2   123137160   60S ribosomal protein L6 
 tae-r.2   123127460   60S ribosomal protein L6 
 tae-r.2   123144665   60S ribosomal protein L6 
 hvu-r.1   123401691   60S ribosomal protein L6-like 
 hvu-r.1   123401134   60S ribosomal protein L6-like 
 sbi-r.1   8073569   60S ribosomal protein L6 
 sbi-r.1   8055433   60S ribosomal protein L6-3 
 bdi-r.1   100836469   60S ribosomal protein L6 
 bdi-r.1   100823288   60S ribosomal protein L6-3 
 cre-r.1   CHLRE_01g011000v5   ribosomal protein L6 

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Top 50 coexpressed genes to 101262004 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262004 (sly-u.5 coexpression data)

CoexMap"101262004"


slyLOC101262004 | Entrez gene ID : 101262004      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 3 3 2 2 2 3 3 2 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly03010 [list] [network] Ribosome (6225 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (27 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (74 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (140 genes)  IEA  
GO:0005840 [list] [network] ribosome  (354 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (342 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004236669.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  mito 1  (predict for XP_004236669.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_004236669.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262004
sly-r.6
for
101262004
sly-m.5
for
101262004
sly-u.5
for
101252946
sly-u.5
for
101250600
sot-r.1
for
102600468
sot-r.1
for
102601402
sot-r.1
for
102594318
nta-r.1
for
107803255
nta-r.1
for
107794249
nta-r.1
for
107786144
ath-u.5
for
AT1G18540
ath-u.5
for
AT1G74050
ath-u.5
for
AT1G74060
gma-u.5
for
100499766
gma-u.5
for
100784101
gma-u.5
for
100500022
bra-r.6
for
103842696
bra-r.6
for
103852878
bra-r.6
for
103872617
vvi-u.5
for
100257150
vvi-u.5
for
100252724
ppo-u.5
for
7454890
ppo-u.5
for
7480099
mtr-u.5
for
11445274
mtr-u.5
for
11423674
ghi-r.1
for
107949445
ghi-r.1
for
107950766
ghi-r.1
for
107948250
bna-r.1
for
106346911
bna-r.1
for
106354362
bna-r.1
for
106361993
cit-r.1
for
102608733
cit-r.1
for
102606973
osa-u.5
for
4329831
osa-u.5
for
4336140
zma-u.5
for
103627361
zma-u.5
for
100191612
zma-u.5
for
118476703
tae-r.2
for
123137160
tae-r.2
for
123127460
tae-r.2
for
123144665
hvu-r.1
for
123401691
hvu-r.1
for
123401134
sbi-r.1
for
8073569
sbi-r.1
for
8055433
bdi-r.1
for
100836469
bdi-r.1
for
100823288
cre-r.1
for
CHLRE_01g011000v5


Ortholog ID: 1642
Species sly sly sly sot sot sot nta nta nta ath ath ath gma gma gma bra bra bra vvi vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna cit cit osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC101262004 LOC101252946 LOC101250600 LOC102600468 LOC102601402 LOC102594318 LOC107803255 LOC107794249 LOC142167951 AT1G18540 AT1G74050 AT1G74060 LOC100499766 LOC100500022 LOC100809343 LOC103852878 LOC103872617 LOC103831880 LOC100257150 LOC100252724 LOC7454890 LOC7480099 LOC11445274 LOC11423674 LOC107922797 LOC121213992 LOC107899683 LOC106369059 LOC106404617 LOC106427170 LOC102608733 LOC102606973 LOC4329831 LOC4336140 LOC103627361 LOC100191612 LOC103653691 LOC123137160 LOC123127460 LOC606333 LOC123401691 LOC123401134 LOC8073569 LOC8055433 LOC100836469 LOC100823288 CHLRE_01g011000v5
Function* large ribosomal subunit protein eL6 large ribosomal subunit protein eL6 large ribosomal subunit protein eL6 60S ribosomal protein L6-like 60S ribosomal protein L6-like 60S ribosomal protein L6-like large ribosomal subunit protein eL6 large ribosomal subunit protein eL6-like large ribosomal subunit protein eL6-like Ribosomal protein L6 family protein Ribosomal protein L6 family protein Ribosomal protein L6 family protein uncharacterized LOC100499766 uncharacterized LOC100500022 ribosomal protein L6 family protein 60S ribosomal protein L6-3 60S ribosomal protein L6-1 60S ribosomal protein L6-2 large ribosomal subunit protein eL6z large ribosomal subunit protein eL6x 60S ribosomal protein L6 60S ribosomal protein L6 60S ribosomal protein L6 60S ribosomal protein L6 60S ribosomal protein L6-1 60S ribosomal protein L6-1 60S ribosomal protein L6 60S ribosomal protein L6-1-like 60S ribosomal protein L6-2 60S ribosomal protein L6-1-like 60S ribosomal protein L6-like 60S ribosomal protein L6-like large ribosomal subunit protein eL6x large ribosomal subunit protein eL6x 60S ribosomal protein L6-like 60S ribosomal protein L6-like 60S ribosomal protein L6-like 60S ribosomal protein L6 60S ribosomal protein L6 60S ribosomal protein L6 60S ribosomal protein L6-like 60S ribosomal protein L6-like 60S ribosomal protein L6 60S ribosomal protein L6-3 60S ribosomal protein L6 60S ribosomal protein L6-3 ribosomal protein L6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 8
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03010 Ribosome 3
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 17
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101262004 101252946 101250600 102600468 102601402 102594318 107803255 107794249 142167951 838435 843744 843746 100499766 100500022 100809343 103852878 103872617 103831880 100257150 100252724 7454890 7480099 11445274 11423674 107922797 121213992 107899683 106369059 106404617 106427170 102608733 102606973 4329831 4336140 103627361 100191612 103653691 123137160 123127460 606333 123401691 123401134 8073569 8055433 100836469 100823288 5715022
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