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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101262304   calreticulin-3-like 
 sly-r.6   101262304   calreticulin-3-like 
 sly-m.5   101262304   calreticulin-3-like 
 sly-u.5   101248677   calreticulin-3 
 ath-u.5   CRT3   calreticulin 3 
 gma-u.5   100776524   calreticulin-3 
 gma-u.5   100802428   calreticulin-3 
 gma-u.5   100801827   calreticulin-3 
 vvi-u.5   100265011   calreticulin-3 
 vvi-u.5   100267984   calreticulin-3 
 ppo-u.5   18106880   calreticulin-3 
 ppo-u.5   18100843   calreticulin-3 
 ppo-u.5   7459231   calreticulin-3 
 mtr-u.5   11437433   calreticulin-3 
 mtr-u.5   11413905   calreticulin-3 
 osa-u.5   9267167   calreticulin-3 
 osa-u.5   4339262   calreticulin-3 
 zma-u.5   100382232   uncharacterized LOC100382232 
 zma-u.5   100273288   calreticulin-3 

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Top 50 coexpressed genes to 101262304 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101262304 (sly-u.5 coexpression data)

CoexMap"101262304"


slyLOC101262304 | Entrez gene ID : 101262304      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 3 2 3 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sly04141 [list] [network] Protein processing in endoplasmic reticulum (216 genes)
sly04145 [list] [network] Phagosome (91 genes)
sly04148 [list] [network] Efferocytosis (57 genes)
GO BP
GO:0006457 [list] [network] protein folding  (160 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (235 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (509 genes)  IEA  
GO MF
GO:0051082 [list] [network] unfolded protein binding  (103 genes)  IEA  
GO:0005509 [list] [network] calcium ion binding  (241 genes)  IEA  
Protein XP_004237555.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1,  plas 1,  E.R. 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_004237555.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_004237555.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101262304

.
sly-r.6
for
101262304

.
sly-m.5
for
101262304

.
sly-u.5
for
101248677

.
ath-u.5
for
CRT3

.
gma-u.5
for
100776524

.
gma-u.5
for
100802428

.
gma-u.5
for
100801827

.
vvi-u.5
for
100265011

.
vvi-u.5
for
100267984

.
ppo-u.5
for
18106880

.
ppo-u.5
for
18100843

.
ppo-u.5
for
7459231

.
mtr-u.5
for
11437433

.
mtr-u.5
for
11413905

.
osa-u.5
for
9267167

.
osa-u.5
for
4339262

.
zma-u.5
for
100382232

.
zma-u.5
for
100273288

.


Ortholog ID: 4304
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol CRT3 LOC100801827 LOC100776524 LOC101248677 LOC101262304 LOC4339262 LOC9267167 LOC100382232 LOC100273288 LOC103843398 LOC103836390 LOC100265011 LOC100267984 LOC18106880 LOC18100843 LOC11437433 LOC11413905 LOC100146083 LOC100682428 LOC123445069 LOC107951946 LOC107938718 LOC106383113 LOC106377035 LOC8056101 LOC8080082 LOC102581294 LOC102606145 LOC102611212 LOC102608719 LOC100837158 LOC100838375 LOC107809051 LOC107776924
Function* calreticulin 3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3-like calreticulin-3 calreticulin-3 uncharacterized LOC100382232 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3-like calreticulin-3-like calreticulin-3-like calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3 calreticulin-3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04145 Phagosome 3
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
sly04626 Plant-pathogen interaction 2
sly04141 Protein processing in endoplasmic reticulum 2
sly04145 Phagosome 2
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 9
osa04145 Phagosome 4
osa04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 10
osa04145 Phagosome 4
osa04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04145 Phagosome 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
zma04145 Phagosome 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 12
vvi04626 Plant-pathogen interaction 3
vvi04145 Phagosome 3
vvi03060 Protein export 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo04148 Efferocytosis 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo04145 Phagosome 3
ppo04148 Efferocytosis 3
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 8
mtr04626 Plant-pathogen interaction 5
mtr04145 Phagosome 4
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 7
tae04145 Phagosome 3
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 13
hvu04145 Phagosome 5
hvu04148 Efferocytosis 2
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 13
ghi04145 Phagosome 7
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04145 Phagosome 4
bna04148 Efferocytosis 4
bna04626 Plant-pathogen interaction 3
bna00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna04145 Phagosome 4
bna04148 Efferocytosis 4
bna00564 Glycerophospholipid metabolism 3
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04145 Phagosome 2
sbi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 8
sbi04145 Phagosome 5
sbi04148 Efferocytosis 4
sbi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 13
sot04145 Phagosome 4
sot00380 Tryptophan metabolism 3
sot04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 9
sot00592 alpha-Linolenic acid metabolism 3
sot04145 Phagosome 3
sot04148 Efferocytosis 2
sot03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
bdi04148 Efferocytosis 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
bdi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04145 Phagosome 4
nta04148 Efferocytosis 4
nta00511 Other glycan degradation 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04145 Phagosome 4
nta04148 Efferocytosis 4
nta04075 Plant hormone signal transduction 3
nta04626 Plant-pathogen interaction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837365 100801827 100776524 101248677 101262304 4339262 9267167 100382232 100273288 103843398 103836390 100265011 100267984 18106880 18100843 11437433 11413905 100146083 100682428 123445069 107951946 107938718 106383113 106377035 8056101 8080082 102581294 102606145 102611212 102608719 100837158 100838375 107809051 107776924
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