ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	101262665	uncharacterized LOC101262665
sly-r.6	101262665	uncharacterized LOC101262665
sly-m.5	101262665	uncharacterized LOC101262665
sly-u.5	101264645	uncharacterized LOC101264645
sot-r.1	102598895	uncharacterized LOC102598895
sot-r.1	102593020	uncharacterized LOC102593020
nta-r.1	107804024	uncharacterized LOC107804024
nta-r.1	107785862	uncharacterized LOC107785862
nta-r.1	107795277	uncharacterized LOC107795277
ath-u.5	AT4G08460	hypothetical protein (DUF1644)
ath-u.5	AT1G68140	zinc finger/BTB domain protein, putative (DUF1644)
ath-u.5	AT1G77770	forkhead box protein, putative (DUF1644)
gma-u.5	100775650	uncharacterized LOC100775650
gma-u.5	100797335	uncharacterized LOC100797335
gma-u.5	100812579	uncharacterized LOC100812579
bra-r.6	103853099	uncharacterized LOC103853099
bra-r.6	103835443	uncharacterized LOC103835443
bra-r.6	103831231	uncharacterized LOC103831231
vvi-u.5	100266910	uncharacterized LOC100266910
vvi-u.5	100259117	uncharacterized LOC100259117
ppo-u.5	7478132	uncharacterized LOC7478132
ppo-u.5	7486691	uncharacterized LOC7486691
ppo-u.5	7495118	uncharacterized LOC7495118
mtr-u.5	25493335	uncharacterized LOC25493335
mtr-u.5	11413824	uncharacterized LOC11413824
ghi-r.1	107908600	uncharacterized LOC107908600
ghi-r.1	107918186	uncharacterized LOC107918186
ghi-r.1	107922314	uncharacterized LOC107922314
bna-r.1	125605969	uncharacterized LOC125605969
bna-r.1	106361874	uncharacterized LOC106361874
bna-r.1	111213497	uncharacterized LOC111213497
cit-r.1	102609948	hypothetical protein
cit-r.1	102626160	hypothetical protein
osa-u.5	4335978	uncharacterized LOC4335978
osa-u.5	4330865	uncharacterized LOC4330865
osa-u.5	4329710	uncharacterized LOC4329710
zma-u.5	100274354	putative DUF1644 and RING zinc finger domain protein
zma-u.5	100192630	uncharacterized LOC100192630
zma-u.5	100383585	uncharacterized LOC100383585
tae-r.2	123128538	uncharacterized LOC123128538
tae-r.2	123045595	uncharacterized LOC123045595
tae-r.2	123053437	uncharacterized LOC123053437
hvu-r.1	123443038	uncharacterized LOC123443038
hvu-r.1	123426849	uncharacterized LOC123426849
hvu-r.1	123401872	uncharacterized LOC123401872
sbi-r.1	8068923	uncharacterized LOC8068923
sbi-r.1	8075209	uncharacterized LOC8075209
sbi-r.1	8073380	uncharacterized LOC8073380
bdi-r.1	100832716	uncharacterized LOC100832716
bdi-r.1	100828313	uncharacterized LOC100828313
bdi-r.1	100828094	uncharacterized LOC100828094

Top 50 coexpressed genes to 101262665 (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 101262665 (sly-u.5 coexpression data)

CoexMap"101262665"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_004230521.1 [sequence] [blastp]
XP_010314981.1 [sequence] [blastp]
XP_019067370.1 [sequence] [blastp]
XP_069149022.1 [sequence] [blastp]
XP_069149023.1 [sequence] [blastp]
XP_069149024.1 [sequence] [blastp]
XP_069149025.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 4, mito 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_004230521.1)
nucl 4, chlo 4, mito 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_010314981.1)
nucl 4, chlo 4, mito 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_019067370.1)
nucl 4, chlo 4, mito 2, cyto_nucl 2, cysk_nucl 2, nucl_plas 2	(predict for XP_069149022.1)
nucl 6, chlo 2, mito 2, chlo_mito 2	(predict for XP_069149023.1)
nucl 6, chlo 2, mito 2, chlo_mito 2	(predict for XP_069149024.1)
nucl 6, chlo 2, mito 2, chlo_mito 2	(predict for XP_069149025.1)

Subcellular
localization
TargetP

mito 5, other 3	(predict for XP_004230521.1)
mito 5, other 3	(predict for XP_010314981.1)
mito 5, other 3	(predict for XP_019067370.1)
mito 5, other 3	(predict for XP_069149022.1)
mito 5, other 3	(predict for XP_069149023.1)
mito 5, other 3	(predict for XP_069149024.1)
mito 5, other 3	(predict for XP_069149025.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for 101262665	sly-r.6 for 101262665	sly-m.5 for 101262665	sly-u.5 for 101264645	sot-r.1 for 102598895	sot-r.1 for 102593020	nta-r.1 for 107804024	nta-r.1 for 107785862	nta-r.1 for 107795277	ath-u.5 for AT4G08460	ath-u.5 for AT1G68140	ath-u.5 for AT1G77770	gma-u.5 for 100775650	gma-u.5 for 100797335	gma-u.5 for 100812579	bra-r.6 for 103853099	bra-r.6 for 103835443	bra-r.6 for 103831231	vvi-u.5 for 100266910	vvi-u.5 for 100259117	ppo-u.5 for 7478132	ppo-u.5 for 7486691	ppo-u.5 for 7495118	mtr-u.5 for 25493335	mtr-u.5 for 11413824	ghi-r.1 for 107908600	ghi-r.1 for 107918186	ghi-r.1 for 107922314	bna-r.1 for 125605969	bna-r.1 for 106361874	bna-r.1 for 111213497	cit-r.1 for 102609948	cit-r.1 for 102626160	osa-u.5 for 4335978	osa-u.5 for 4330865	osa-u.5 for 4329710	zma-u.5 for 100274354	zma-u.5 for 100192630	zma-u.5 for 100383585	tae-r.2 for 123128538	tae-r.2 for 123045595	tae-r.2 for 123053437	hvu-r.1 for 123443038	hvu-r.1 for 123426849	hvu-r.1 for 123401872	sbi-r.1 for 8068923	sbi-r.1 for 8075209	sbi-r.1 for 8073380	bdi-r.1 for 100832716	bdi-r.1 for 100828313	bdi-r.1 for 100828094

Ortholog

Ortholog ID: 1509

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC101262665

uncharacterized LOC101264645

uncharacterized LOC102598895

uncharacterized LOC102593020

uncharacterized LOC107795277

uncharacterized LOC107828332

uncharacterized LOC107778819

hypothetical protein (DUF1644)

zinc finger/BTB domain protein, putative (DUF1644)

forkhead box protein, putative (DUF1644)

uncharacterized LOC100797335

uncharacterized LOC100812579

uncharacterized LOC100819473

uncharacterized LOC103853099

uncharacterized LOC103858479

uncharacterized LOC103830550

uncharacterized LOC100266910

uncharacterized LOC100259117

uncharacterized LOC7478132

uncharacterized LOC7486691

uncharacterized LOC7495118

uncharacterized LOC25493335

uncharacterized LOC11413824

uncharacterized LOC107918186

uncharacterized LOC121222483

uncharacterized LOC107900991

uncharacterized LOC106361874

uncharacterized BNACNNG61150D

uncharacterized LOC106453272

hypothetical protein

uncharacterized LOC4335978

uncharacterized LOC4330865

uncharacterized LOC4329710

putative DUF1644 and RING zinc finger domain protein

uncharacterized LOC100192630

uncharacterized LOC100383585

uncharacterized LOC123060530

uncharacterized LOC123138404

uncharacterized LOC123189344

uncharacterized LOC123443038

uncharacterized LOC123426849

uncharacterized LOC123401872

uncharacterized LOC8068923

uncharacterized LOC8075209

uncharacterized LOC8073380

uncharacterized LOC100832716

uncharacterized LOC100828313

uncharacterized LOC100828094

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00030	Pentose phosphate pathway	3
sot01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	4
nta00240	Pyrimidine metabolism	4
nta00760	Nicotinate and nicotinamide metabolism	4
nta01232	Nucleotide metabolism	4
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00061	Fatty acid biosynthesis	2
gma00280	Valine, leucine and isoleucine degradation	2
gma01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2
bra03040	Spliceosome	2
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2
ppo03015	mRNA surveillance pathway	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	7
mtr03060	Protein export	2
mtr04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	5
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	4
zma03013	Nucleocytoplasmic transport	4
zma04382	Cornified envelope formation	3
zma00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04145	Phagosome	2
zma04148	Efferocytosis	2
zma04517	IgSF CAM signaling	2
zma04518	Integrin signaling	2
zma04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	3
tae03015	mRNA surveillance pathway	2
tae04016	MAPK signaling pathway - plant	2
tae04070	Phosphatidylinositol signaling system	2
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2
hvu03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	3
sbi00860	Porphyrin metabolism	2
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2
sbi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	4
bdi00190	Oxidative phosphorylation	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00052	Galactose metabolism	2
bdi00500	Starch and sucrose metabolism	2
bdi00520	Amino sugar and nucleotide sugar metabolism	2
bdi01250	Biosynthesis of nucleotide sugars	2
bdi00020	Citrate cycle (TCA cycle)	2

Expression

Expression pattern

Entrez Gene ID^*

101262665

101264645

102598895

102593020

107795277

107828332

107778819

826405

843142

844114

100797335

100812579

100819473

103853099

103858479

103830550

100266910

100259117

7478132

7486691

7495118

25493335

11413824

107918186

121222483

107900991

106361874

106405943

106453272

102609948

102626160

4335978

4330865

4329710

100274354

100192630

100383585

123060530

123138404

123189344

123443038

123426849

123401872

8068923

8075209

8073380

100832716

100828313

100828094

The preparation time of this page was 0.1 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	3	3	2	3	2	3	3	2	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 101262665 (sly-u.5 coexpression data)

Top 50 enrichment test to 101262665 (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**