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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101264063   pentatricopeptide repeat-containing protein At5g18950 
 sly-r.6   101264063   pentatricopeptide repeat-containing protein At5g18950 
 sot-r.1   102604789   pentatricopeptide repeat-containing protein At5g18950 
 nta-r.1   107772350   uncharacterized LOC107772350 
 nta-r.1   107802034   uncharacterized LOC107802034 
 ath-u.5   AT5G18950   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103845797   pentatricopeptide repeat-containing protein At5g18950 
 vvi-u.5   104879243   pentatricopeptide repeat-containing protein At5g18950 
 mtr-u.5   11437372   pentatricopeptide repeat-containing protein At5g18950 
 ghi-r.1   107888908   pentatricopeptide repeat-containing protein At5g18950-like 
 ghi-r.1   107891883   pentatricopeptide repeat-containing protein At5g18950 
 bna-r.1   106371844   pentatricopeptide repeat-containing protein At5g18950-like 
 bna-r.1   106388067   pentatricopeptide repeat-containing protein At5g18950-like 
 cit-r.1   102607785   pentatricopeptide repeat-containing protein At5g18950 

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Top 50 coexpressed genes to 101264063 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101264063 (sly-u.5 coexpression data)

CoexMap"101264063"


slyLOC101264063 | Entrez gene ID : 101264063    
Species sly sot nta ath bra vvi mtr ghi bna cit sbi osa gma tae hvu ppo zma cre bdi
Paralog 2 1 2 1 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004229464.1 [sequence] [blastp]
XP_010322824.1 [sequence] [blastp]
XP_010322828.1 [sequence] [blastp]
XP_069155483.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  cyto_mito 1  (predict for XP_004229464.1)
chlo 7,  nucl 1,  mito 1,  cyto_mito 1  (predict for XP_010322824.1)
chlo 7,  nucl 1,  mito 1,  cyto_mito 1  (predict for XP_010322828.1)
chlo 7,  nucl 1,  mito 1,  cyto_mito 1  (predict for XP_069155483.1)
Subcellular
localization
TargetP
mito 6,  chlo 4  (predict for XP_004229464.1)
mito 6,  chlo 4  (predict for XP_010322824.1)
mito 6,  chlo 4  (predict for XP_010322828.1)
mito 6,  chlo 4  (predict for XP_069155483.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101264063
sly-r.6
for
101264063
sot-r.1
for
102604789
nta-r.1
for
107772350
nta-r.1
for
107802034
ath-u.5
for
AT5G18950
bra-r.6
for
103845797
vvi-u.5
for
104879243
mtr-u.5
for
11437372
ghi-r.1
for
107888908
ghi-r.1
for
107891883
bna-r.1
for
106371844
bna-r.1
for
106388067
cit-r.1
for
102607785


Ortholog ID: 13740
Species sly sot nta nta ath bra vvi mtr ghi ghi bna bna cit
Symbol LOC101264063 LOC102604789 LOC107772350 LOC107802034 AT5G18950 LOC103845797 LOC104879243 LOC11437372 LOC107888908 LOC107891883 LOC106371844 LOC106388067 LOC102607785
Function* pentatricopeptide repeat-containing protein At5g18950 pentatricopeptide repeat-containing protein At5g18950 uncharacterized LOC107772350 uncharacterized LOC107802034 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g18950 pentatricopeptide repeat-containing protein At5g18950 pentatricopeptide repeat-containing protein At5g18950 pentatricopeptide repeat-containing protein At5g18950-like pentatricopeptide repeat-containing protein At5g18950 pentatricopeptide repeat-containing protein At5g18950-like pentatricopeptide repeat-containing protein At5g18950-like pentatricopeptide repeat-containing protein At5g18950
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03250 Viral life cycle - HIV-1 2
bna03272 Virion - Hepatitis viruses 2
bna04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101264063 102604789 107772350 107802034 832013 103845797 104879243 11437372 107888908 107891883 106371844 106388067 102607785
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