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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101267583   ribonuclease 3-like protein 2 
 sly-r.6   101267583   ribonuclease 3-like protein 2 
 sly-m.5   101267583   ribonuclease 3-like protein 2 
 sly-u.5   101253789   ribonuclease 3-like protein 3 
 sly-u.5   101248023   ribonuclease 3-like protein 3 
 ath-u.5   RTL2   RNAse THREE-like protein 2 
 ath-u.5   RTL3   RNAse THREE-like protein 3 
 gma-u.5   100802288   ribonuclease 3-like protein 2 
 vvi-u.5   100260185   ribonuclease 3-like protein 3 
 vvi-u.5   100243580   ribonuclease 3-like protein 2 
 ppo-u.5   7489887   ribonuclease 3-like protein 3 
 ppo-u.5   7483612   ribonuclease 3-like protein 2 
 mtr-u.5   11435654   ribonuclease 3-like protein 2 
 mtr-u.5   11427553   endoribonuclease Dicer homolog 1 
 mtr-u.5   11421270   ribonuclease 3-like protein 2 
 osa-u.5   4340996   ribonuclease 3-like protein 3 
 osa-u.5   4338262   ribonuclease 3-like protein 2 
 osa-u.5   4325844   ribonuclease 3-like protein 1 
 zma-u.5   100273842   uncharacterized LOC100273842 
 zma-u.5   100272891   Ribonuclease 3-like protein 2 

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Top 50 coexpressed genes to 101267583 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101267583 (sly-u.5 coexpression data)

CoexMap"101267583"


slyLOC101267583 | Entrez gene ID : 101267583      
Species sly ath gma vvi ppo mtr osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 2 1 2 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030422 [list] [network] siRNA processing  (20 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2947 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (5127 genes)  IEA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (17 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1208 genes)  IEA  
Protein XP_004251917.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  cyto_nucl 1,  plas 1,  E.R. 1,  E.R._plas 1  (predict for XP_004251917.1)
Subcellular
localization
TargetP
other 4,  mito 4  (predict for XP_004251917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101267583

.
sly-r.6
for
101267583

.
sly-m.5
for
101267583

.
sly-u.5
for
101253789

.
sly-u.5
for
101248023

.
ath-u.5
for
RTL2

.
ath-u.5
for
RTL3

.
gma-u.5
for
100802288

.
vvi-u.5
for
100260185

.
vvi-u.5
for
100243580

.
ppo-u.5
for
7489887

.
ppo-u.5
for
7483612

.
mtr-u.5
for
11435654

.
mtr-u.5
for
11427553

.
mtr-u.5
for
11421270

.
osa-u.5
for
4340996

.
osa-u.5
for
4338262

.
osa-u.5
for
4325844

.
zma-u.5
for
100273842

.
zma-u.5
for
100272891

.


Ortholog ID: 1271
Species ath gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr tae hvu hvu ghi ghi bna cre sbi sbi sot sot cit bdi bdi nta
Symbol RTL2 LOC100802288 LOC101248023 LOC4340996 LOC4338262 LOC100273842 LOC100272891 LOC103860778 LOC103869324 LOC100260185 LOC100243580 LOC7489887 LOC7483612 LOC25501225 LOC123151369 LOC123408939 LOC123410029 LOC107932710 LOC107956815 LOC106434363 CHLRE_16g684715v5 LOC8071008 LOC8061288 LOC102599964 LOC102598686 LOC102617758 LOC100845957 LOC100825810 LOC107771465
Function* RNAse THREE-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 uncharacterized LOC100273842 Ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 uncharacterized protein ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3 ribonuclease 3-like protein 3 ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 2 ribonuclease 3-like protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03050 Proteasome 2
gma03272 Virion - Hepatitis viruses 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00230 Purine metabolism 2
bra04142 Lysosome 2
bra00460 Cyanoamino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00020 Citrate cycle (TCA cycle) 3
ppo00620 Pyruvate metabolism 3
ppo01200 Carbon metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 5
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 2
hvu01200 Carbon metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03060 Protein export 2
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 3
ghi00052 Galactose metabolism 2
ghi00940 Phenylpropanoid biosynthesis 2
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 3
bna04626 Plant-pathogen interaction 2
bna00460 Cyanoamino acid metabolism 2
bna00500 Starch and sucrose metabolism 2
bna00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821587 100802288 101248023 4340996 4338262 100273842 100272891 103860778 103869324 100260185 100243580 7489887 7483612 25501225 123151369 123408939 123410029 107932710 107956815 106434363 5724419 8071008 8061288 102599964 102598686 102617758 100845957 100825810 107771465
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