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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101267946   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 sly-r.6   101267946   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 sot-r.1   102601694   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 nta-r.1   107777643   uncharacterized LOC107777643 
 nta-r.1   107811317   uncharacterized LOC107811317 
 ath-u.5   AT5G14770   PPR repeat protein 
 gma-u.5   100807076   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 bra-r.6   103846460   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 vvi-u.5   100259674   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 ppo-u.5   7491083   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 mtr-u.5   25493189   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 mtr-u.5   25501355   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 ghi-r.1   107905289   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 ghi-r.1   121230445   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 bna-r.1   106372115   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 bna-r.1   106418327   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 
 cit-r.1   102608355   pentatricopeptide repeat-containing protein At5g14770, mitochondrial 

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Top 50 coexpressed genes to 101267946 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101267946 (sly-u.5 coexpression data)

CoexMap"101267946"


slyLOC101267946 | Entrez gene ID : 101267946    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit sbi osa tae hvu zma cre bdi
Paralog 2 1 2 1 1 1 1 1 2 2 2 1 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_004231279.1 [sequence] [blastp]
XP_010313020.1 [sequence] [blastp]
XP_010313022.1 [sequence] [blastp]
XP_010313024.1 [sequence] [blastp]
XP_019066996.1 [sequence] [blastp]
XP_025888494.1 [sequence] [blastp]
XP_025888495.1 [sequence] [blastp]
XP_025888501.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 1,  mito 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_004231279.1)
chlo 4,  cyto 1,  mito 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_010313020.1)
chlo 4,  cyto 1,  mito 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_010313022.1)
chlo 4,  cyto 1,  mito 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_010313024.1)
chlo_mito 3,  chlo 2,  mito 2,  cyto 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_019066996.1)
chlo 4,  cyto 1,  mito 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_025888494.1)
chlo 4,  cyto 1,  mito 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_mito 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_025888495.1)
chlo_mito 3,  chlo 2,  mito 2,  cyto 1,  vacu 1,  plas 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_025888501.1)
Subcellular
localization
TargetP
mito 1  (predict for XP_004231279.1)
mito 1  (predict for XP_010313020.1)
mito 1  (predict for XP_010313022.1)
mito 1  (predict for XP_010313024.1)
mito 1  (predict for XP_019066996.1)
mito 1  (predict for XP_025888494.1)
mito 1  (predict for XP_025888495.1)
mito 1  (predict for XP_025888501.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101267946
sly-r.6
for
101267946
sot-r.1
for
102601694
nta-r.1
for
107777643
nta-r.1
for
107811317
ath-u.5
for
AT5G14770
gma-u.5
for
100807076
bra-r.6
for
103846460
vvi-u.5
for
100259674
ppo-u.5
for
7491083
mtr-u.5
for
25493189
mtr-u.5
for
25501355
ghi-r.1
for
107905289
ghi-r.1
for
121230445
bna-r.1
for
106372115
bna-r.1
for
106418327
cit-r.1
for
102608355


Ortholog ID: 13194
Species sly sot nta nta ath gma bra vvi ppo mtr mtr ghi ghi bna bna cit
Symbol LOC101267946 LOC102601694 LOC107777643 LOC107811317 AT5G14770 LOC100807076 LOC103846460 LOC100259674 LOC7491083 LOC25493189 LOC25501355 LOC107905289 LOC121230445 LOC106372115 LOC106418327 LOC102608355
Function* pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial uncharacterized LOC107777643 uncharacterized LOC107811317 PPR repeat protein pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial pentatricopeptide repeat-containing protein At5g14770, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr04626 Plant-pathogen interaction 3
mtr04016 MAPK signaling pathway - plant 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101267946 102601694 107777643 107811317 831329 100807076 103846460 100259674 7491083 25493189 25501355 107905289 121230445 106372115 106418327 102608355
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