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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   104648069   pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like 
 sly-r.6   104648069   pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like 
 sot-r.1   102604772   pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like 
 nta-r.1   107825499   pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like 
 nta-r.1   107794337   pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like 
 ath-u.5   AT1G56690   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100809239   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 bra-r.6   103838675   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 vvi-u.5   100244365   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 mtr-u.5   11432085   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 ghi-r.1   107893732   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 ghi-r.1   107933812   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 bna-r.1   106449021   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 bna-r.1   106432613   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 cit-r.1   102608726   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 osa-u.5   9272128   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 zma-u.5   103634583   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 tae-r.2   123092297   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 tae-r.2   123085709   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 hvu-r.1   123448785   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 
 bdi-r.1   100821744   pentatricopeptide repeat-containing protein At1g56690, mitochondrial 

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Top 50 coexpressed genes to 104648069 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104648069 (sly-u.5 coexpression data)

CoexMap"104648069"


slyLOC104648069 | Entrez gene ID : 104648069    
Species sly sot nta ath gma bra vvi mtr ghi bna cit osa zma tae hvu bdi sbi cre ppo
Paralog 2 1 2 1 1 1 1 1 2 2 1 1 1 2 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_010322786.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  vacu 1  (predict for XP_010322786.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_010322786.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
104648069
sly-r.6
for
104648069
sot-r.1
for
102604772
nta-r.1
for
107825499
nta-r.1
for
107794337
ath-u.5
for
AT1G56690
gma-u.5
for
100809239
bra-r.6
for
103838675
vvi-u.5
for
100244365
mtr-u.5
for
11432085
ghi-r.1
for
107893732
ghi-r.1
for
107933812
bna-r.1
for
106449021
bna-r.1
for
106432613
cit-r.1
for
102608726
osa-u.5
for
9272128
zma-u.5
for
103634583
tae-r.2
for
123092297
tae-r.2
for
123085709
hvu-r.1
for
123448785
bdi-r.1
for
100821744


Ortholog ID: 10440
Species sly sot nta nta ath gma bra vvi mtr ghi ghi bna bna cit osa zma tae tae hvu bdi
Symbol LOC104648069 LOC102604772 LOC107825499 LOC107794337 AT1G56690 LOC100809239 LOC103838675 LOC100244365 LOC11432085 LOC107893732 LOC107933812 LOC106449021 LOC106432613 LOC102608726 LOC9272128 LOC103634583 LOC123092297 LOC123085709 LOC123448785 LOC100821744
Function* pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like pentatricopeptide repeat-containing protein At1g56690, mitochondrial-like Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial pentatricopeptide repeat-containing protein At1g56690, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 2
osa00280 Valine, leucine and isoleucine degradation 2
osa04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104648069 102604772 107825499 107794337 842125 100809239 103838675 100244365 11432085 107893732 107933812 106449021 106432613 102608726 9272128 103634583 123092297 123085709 123448785 100821744
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