ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sly-u.5	TAL	transaldolase
sly-r.6	TAL	transaldolase
sly-m.5	TAL	transaldolase
sot-r.1	102577741	transaldolase-like protein
nta-r.1	107804952	uncharacterized LOC107804952
nta-r.1	107792012	transaldolase-like
ath-u.5	TRA2	Aldolase-type TIM barrel family protein
gma-u.5	100816075	transaldolase
gma-u.5	100807267	transaldolase
bra-r.6	103856014	transaldolase
bra-r.6	103850867	transaldolase
bra-r.6	103846575	transaldolase
vvi-u.5	100247241	uncharacterized LOC100247241
ppo-u.5	7496524	uncharacterized LOC7496524
ppo-u.5	7482826	uncharacterized LOC7482826
mtr-u.5	11406940	transaldolase
ghi-r.1	121215926	transaldolase
ghi-r.1	107898983	transaldolase
bna-r.1	106372299	transaldolase
bna-r.1	111204272	transaldolase-like
bna-r.1	106345855	transaldolase-like
cit-r.1	102622193	hypothetical protein
osa-u.5	4327239	transaldolase
zma-u.5	100284080	uncharacterized LOC100284080
zma-u.5	100284307	transaldolase 2
tae-r.2	123080370	transaldolase
tae-r.2	123072083	transaldolase
tae-r.2	123063182	transaldolase
hvu-r.1	123445302	transaldolase
sbi-r.1	110434038	transaldolase
bdi-r.1	100830710	transaldolase

Top 50 coexpressed genes to TAL (sly-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to TAL (sly-u.5 coexpression data)

CoexMap"543623"

[Cytoscape]

Annotation

functional annotation

KEGG

sly00030 [list] [network] Pentose phosphate pathway (55 genes)

sly00710 [list] [network] Carbon fixation by Calvin cycle (82 genes)

sly01200 [list] [network] Carbon metabolism (290 genes)

sly01230 [list] [network] Biosynthesis of amino acids (226 genes)

GO BP

GO:0006098 [list] [network] pentose-phosphate shunt	(21 genes)	IEA
GO:0005975 [list] [network] carbohydrate metabolic process	(703 genes)	IEA

GO CC

GO:0005737 [list] [network] cytoplasm	(5127 genes)	IEA
GO:0005622 [list] [network] intracellular anatomical structure	(7992 genes)	IEA

GO MF

GO:0004801 [list] [network] transaldolase activity

(2 genes)

IEA

Protein

NP_001234354.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1

(predict for NP_001234354.2)

Subcellular
localization
TargetP

chlo 9

(predict for NP_001234354.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sly-u.5 for TAL	sly-r.6 for TAL	sly-m.5 for TAL	sot-r.1 for 102577741	nta-r.1 for 107804952	nta-r.1 for 107792012	ath-u.5 for TRA2	gma-u.5 for 100816075	gma-u.5 for 100807267	bra-r.6 for 103856014	bra-r.6 for 103850867	bra-r.6 for 103846575	vvi-u.5 for 100247241	ppo-u.5 for 7496524	ppo-u.5 for 7482826	mtr-u.5 for 11406940	ghi-r.1 for 121215926	ghi-r.1 for 107898983	bna-r.1 for 106372299	bna-r.1 for 111204272	bna-r.1 for 106345855	cit-r.1 for 102622193	osa-u.5 for 4327239	zma-u.5 for 100284080	zma-u.5 for 100284307	tae-r.2 for 123080370	tae-r.2 for 123072083	tae-r.2 for 123063182	hvu-r.1 for 123445302	sbi-r.1 for 110434038	bdi-r.1 for 100830710

Ortholog

Ortholog ID: 7716

Species

sly

sot

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

TAL

TRA2

Function^*

transaldolase

transaldolase-like protein

uncharacterized LOC107804952

transaldolase-like

Aldolase-type TIM barrel family protein

transaldolase

uncharacterized LOC100247241

uncharacterized LOC7496524

uncharacterized LOC7482826

transaldolase

transaldolase-like

hypothetical protein

transaldolase

uncharacterized LOC100284080

transaldolase 2

transaldolase

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	8
sly01200	Carbon metabolism	7
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
sly00030	Pentose phosphate pathway	4
sly00710	Carbon fixation by Calvin cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	9
sot01230	Biosynthesis of amino acids	7
sot00010	Glycolysis / Gluconeogenesis	5
sot00710	Carbon fixation by Calvin cycle	5
sot00900	Terpenoid backbone biosynthesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00030	Pentose phosphate pathway	6
nta00710	Carbon fixation by Calvin cycle	6
nta01200	Carbon metabolism	6
nta01230	Biosynthesis of amino acids	6
nta00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01230	Biosynthesis of amino acids	8
nta00030	Pentose phosphate pathway	6
nta00710	Carbon fixation by Calvin cycle	6
nta01200	Carbon metabolism	6
nta00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	10
ath01230	Biosynthesis of amino acids	7
ath00010	Glycolysis / Gluconeogenesis	6
ath00030	Pentose phosphate pathway	6
ath00710	Carbon fixation by Calvin cycle	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	12
gma01230	Biosynthesis of amino acids	9
gma00030	Pentose phosphate pathway	8
gma00710	Carbon fixation by Calvin cycle	7
gma00010	Glycolysis / Gluconeogenesis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	10
gma01230	Biosynthesis of amino acids	9
gma00030	Pentose phosphate pathway	8
gma00710	Carbon fixation by Calvin cycle	7
gma00010	Glycolysis / Gluconeogenesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4
bra00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	5
bra00030	Pentose phosphate pathway	4
bra00480	Glutathione metabolism	3
bra01230	Biosynthesis of amino acids	3
bra00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	8
bra00030	Pentose phosphate pathway	7
bra00480	Glutathione metabolism	5
bra01230	Biosynthesis of amino acids	3
bra00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01230	Biosynthesis of amino acids	13
vvi01200	Carbon metabolism	11
vvi00010	Glycolysis / Gluconeogenesis	8
vvi00710	Carbon fixation by Calvin cycle	6
vvi00030	Pentose phosphate pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	11
ppo01200	Carbon metabolism	6
ppo00270	Cysteine and methionine metabolism	6
ppo00450	Selenocompound metabolism	4
ppo00670	One carbon pool by folate	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00071	Fatty acid degradation	4
ppo01200	Carbon metabolism	4
ppo04146	Peroxisome	3
ppo00592	alpha-Linolenic acid metabolism	3
ppo01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	8
mtr00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
mtr00350	Tyrosine metabolism	3
mtr01200	Carbon metabolism	3
mtr00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00030	Pentose phosphate pathway	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00030	Pentose phosphate pathway	6
bna00710	Carbon fixation by Calvin cycle	6
bna01200	Carbon metabolism	6
bna01230	Biosynthesis of amino acids	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00030	Pentose phosphate pathway	6
bna00710	Carbon fixation by Calvin cycle	6
bna01200	Carbon metabolism	6
bna01230	Biosynthesis of amino acids	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00030	Pentose phosphate pathway	6
bna00710	Carbon fixation by Calvin cycle	6
bna01200	Carbon metabolism	6
bna01230	Biosynthesis of amino acids	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	5
cit01200	Carbon metabolism	4
cit01230	Biosynthesis of amino acids	4
cit00710	Carbon fixation by Calvin cycle	3
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	9
osa01230	Biosynthesis of amino acids	9
osa00270	Cysteine and methionine metabolism	5
osa00710	Carbon fixation by Calvin cycle	4
osa00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	11
zma01230	Biosynthesis of amino acids	8
zma00030	Pentose phosphate pathway	5
zma00010	Glycolysis / Gluconeogenesis	4
zma00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	10
zma00030	Pentose phosphate pathway	5
zma01230	Biosynthesis of amino acids	4
zma00670	One carbon pool by folate	3
zma00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	7
tae01200	Carbon metabolism	7
tae00380	Tryptophan metabolism	5
tae01230	Biosynthesis of amino acids	5
tae00480	Glutathione metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	6
tae00480	Glutathione metabolism	6
tae00030	Pentose phosphate pathway	5
tae01200	Carbon metabolism	5
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00480	Glutathione metabolism	12
tae00030	Pentose phosphate pathway	8
tae01200	Carbon metabolism	8
tae01230	Biosynthesis of amino acids	5
tae00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	9
hvu01200	Carbon metabolism	7
hvu00260	Glycine, serine and threonine metabolism	3
hvu00270	Cysteine and methionine metabolism	2
hvu00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	6
sbi00030	Pentose phosphate pathway	5
sbi01230	Biosynthesis of amino acids	4
sbi00195	Photosynthesis	3
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	10
bdi01200	Carbon metabolism	8
bdi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	5
bdi00030	Pentose phosphate pathway	4
bdi00260	Glycine, serine and threonine metabolism	4

Expression

Expression pattern

Entrez Gene ID^*

543623

102577741

107804952

107792012

831183

100816075

100807267

103856014

103850867

103846575

100247241

7496524

7482826

11406940

121215926

107898983

111204272

106345855

106384143

102622193

4327239

100284080

100284307

123080370

123072083

123063182

123445302

110434038

100830710

The preparation time of this page was 1.6 [sec].


Species	sly	sot	nta	ath	gma	bra	vvi	ppo	mtr	ghi	bna	cit	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	2	1	2	3	1	2	1	2	3	1	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to TAL (sly-u.5 coexpression data)

Top 50 enrichment test to TAL (sly-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**