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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   ERF4   ethylene response factor 4 
 sly-r.6   ERF4   ethylene response factor 4 
 sly-m.5   ERF4   ethylene response factor 4 
 sot-r.1   102588222   ethylene-responsive transcription factor ERF106 
 nta-r.1   107818655   ethylene-responsive transcription factor ERF106-like 
 nta-r.1   107818654   ethylene-responsive transcription factor ERF106-like 
 nta-r.1   107810929   ethylene-responsive transcription factor ERF106-like 
 ath-u.5   AT5G07580   ethylene-responsive transcription factor 
 ath-u.5   AT5G61590   Integrase-type DNA-binding superfamily protein 
 gma-u.5   100499732   DNA-binding domain-containing protein 
 gma-u.5   100306125   putative ethylene-responsive transcription factor 
 gma-u.5   100305726   DNA-binding domain-containing protein 
 bra-r.6   103847045   ethylene-responsive transcription factor ERF106 
 bra-r.6   103850661   ethylene-responsive transcription factor ERF106 
 bra-r.6   103860609   ethylene-responsive transcription factor ERF107 
 ppo-u.5   7477798   ethylene-responsive transcription factor ERF106 
 ppo-u.5   18097074   ethylene-responsive transcription factor ERF106 
 mtr-u.5   11424269   ethylene-responsive transcription factor ERF107 
 mtr-u.5   11422933   ethylene-responsive transcription factor ERF106 
 ghi-r.1   107913192   ethylene-responsive transcription factor ERF107 
 ghi-r.1   107922974   ethylene-responsive transcription factor ERF107 
 ghi-r.1   107953621   ethylene-responsive transcription factor ERF106 
 bna-r.1   125581552   ethylene-responsive transcription factor ERF106-like 
 bna-r.1   125607083   ethylene-responsive transcription factor ERF107-like 
 bna-r.1   106446070   ethylene-responsive transcription factor ERF106-like 
 cit-r.1   102625681   ethylene-responsive transcription factor ERF107 

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Top 50 coexpressed genes to ERF4 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ERF4 (sly-u.5 coexpression data)

CoexMap"543867"


slyERF4 | Entrez gene ID : 543867      
Species sly sot nta ath gma bra ppo mtr ghi bna cit cre vvi hvu tae bdi osa zma sbi
Paralog 3 1 3 2 3 3 2 2 3 3 1 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009873 [list] [network] ethylene-activated signaling pathway  (53 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1125 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1883 genes)  IEA  
Protein NP_001234313.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001234313.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001234313.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
ERF4
sly-r.6
for
ERF4
sly-m.5
for
ERF4
sot-r.1
for
102588222
nta-r.1
for
107818655
nta-r.1
for
107818654
nta-r.1
for
107810929
ath-u.5
for
AT5G07580
ath-u.5
for
AT5G61590
gma-u.5
for
100499732
gma-u.5
for
100306125
gma-u.5
for
100305726
bra-r.6
for
103847045
bra-r.6
for
103850661
bra-r.6
for
103860609
ppo-u.5
for
7477798
ppo-u.5
for
18097074
mtr-u.5
for
11424269
mtr-u.5
for
11422933
ghi-r.1
for
107913192
ghi-r.1
for
107922974
ghi-r.1
for
107953621
bna-r.1
for
125581552
bna-r.1
for
125607083
bna-r.1
for
106446070
cit-r.1
for
102625681


Ortholog ID: 6957
Species sly sot nta nta nta ath ath gma gma gma bra bra bra ppo ppo mtr mtr ghi ghi ghi bna bna bna cit
Symbol ERF4 LOC102588222 LOC107818655 LOC107818654 LOC107810929 AT5G07580 AT5G61590 LOC100499732 LOC100305726 LOC100500502 LOC103847045 LOC103850661 LOC103860609 LOC7477798 LOC18097074 LOC11424269 LOC11422933 LOC107922974 LOC107953621 LOC107912054 LOC106419474 LOC106379879 LOC106422689 LOC102625681
Function* ethylene response factor 4 ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF106-like ethylene-responsive transcription factor ERF106-like ethylene-responsive transcription factor ERF106-like ethylene-responsive transcription factor Integrase-type DNA-binding superfamily protein DNA-binding domain-containing protein DNA-binding domain-containing protein DNA-binding domain-containing protein ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF107 ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF107 ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF107 ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF107 ethylene-responsive transcription factor ERF106 ethylene-responsive transcription factor ERF107 ethylene-responsive transcription factor ERF106-like ethylene-responsive transcription factor ERF107
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta04075 Plant hormone signal transduction 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 4
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 5
ath04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 543867 102588222 107818655 107818654 107810929 830651 836280 100499732 100305726 100500502 103847045 103850661 103860609 7477798 18097074 11424269 11422933 107922974 107953621 107912054 106419474 106379879 106422689 102625681
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