ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	100049034	protein SGT1 homolog
tae-r.2	123061535	protein SGT1 homolog
tae-r.2	123070173	protein SGT1 homolog
hvu-r.1	123443917	protein SGT1 homolog
bdi-r.1	100838478	protein SGT1 homolog
osa-u.5	4326682	protein SGT1 homolog
zma-u.5	100282745	uncharacterized LOC100282745
zma-u.5	103636097	protein SGT1 homolog
sbi-r.1	8084854	protein SGT1 homolog
ath-u.5	SGT1B	phosphatase-like protein
ath-u.5	SGT1A	phosphatase-like protein
gma-u.5	100784022	protein SGT1 homolog A
gma-u.5	100194421	SGT1-2
gma-u.5	100194420	SGT1-1
sly-u.5	101258374	protein SGT1 homolog A-like
bra-r.6	103833887	protein SGT1 homolog B
bra-r.6	103858599	protein SGT1 homolog B
bra-r.6	103861407	protein SGT1 homolog A
vvi-u.5	100244083	protein SGT1 homolog
ppo-u.5	18106438	protein SGT1 homolog
ppo-u.5	7468358	protein SGT1 homolog
mtr-u.5	25496516	protein SGT1 homolog A
mtr-u.5	11436240	protein SGT1 homolog A
ghi-r.1	107914611	protein SGT1 homolog B
ghi-r.1	107917913	protein SGT1 homolog B
ghi-r.1	107942356	protein SGT1 homolog B
bna-r.1	106440530	protein SGT1 homolog A
bna-r.1	106438799	protein SGT1 homolog B
bna-r.1	106434696	protein SGT1 homolog A
sot-r.1	102599444	protein SGT1 homolog
sot-r.1	102579484	protein SGT1 homolog A-like
cit-r.1	102623505	protein SGT1 homolog B
nta-r.1	107809968	protein SGT1 homolog
nta-r.1	107786122	protein SGT1 homolog
cre-r.1	CHLRE_12g513600v5	uncharacterized protein

Top 50 coexpressed genes to 100049034 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100049034 (tae-r.2 coexpression data)

CoexMap"100049034"

[Cytoscape]

Annotation

functional annotation

KEGG

taes04626 [list] [network] Plant-pathogen interaction (844 genes)

GO BP

GO CC

GO MF

GO:0051087 [list] [network] protein-folding chaperone binding

(175 genes)

IEA

Protein

XP_044357108.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 2, cysk_nucl 2, cyto 1, mito 1

(predict for XP_044357108.1)

Subcellular
localization
TargetP

other 7

(predict for XP_044357108.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 100049034	tae-r.2 for 123061535	tae-r.2 for 123070173	hvu-r.1 for 123443917	bdi-r.1 for 100838478	osa-u.5 for 4326682	zma-u.5 for 100282745	zma-u.5 for 103636097	sbi-r.1 for 8084854	ath-u.5 for SGT1B	ath-u.5 for SGT1A	gma-u.5 for 100784022	gma-u.5 for 100194421	gma-u.5 for 100194420	sly-u.5 for 101258374	bra-r.6 for 103833887	bra-r.6 for 103858599	bra-r.6 for 103861407	vvi-u.5 for 100244083	ppo-u.5 for 18106438	ppo-u.5 for 7468358	mtr-u.5 for 25496516	mtr-u.5 for 11436240	ghi-r.1 for 107914611	ghi-r.1 for 107917913	ghi-r.1 for 107942356	bna-r.1 for 106440530	bna-r.1 for 106438799	bna-r.1 for 106434696	sot-r.1 for 102599444	sot-r.1 for 102579484	cit-r.1 for 102623505	nta-r.1 for 107809968	nta-r.1 for 107786122	cre-r.1 for CHLRE_12g513600v5

Ortholog

Ortholog ID: 3954

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

SGT1B

SGT1A

Function^*

protein SGT1 homolog

uncharacterized LOC100282745

protein SGT1 homolog

phosphatase-like protein

SGT1-2

SGT1-1

protein SGT1 homolog B-like

protein SGT1 homolog A-like

protein SGT1 homolog B

protein SGT1 homolog A

protein SGT1 homolog

protein SGT1 homolog A

protein SGT1 homolog B

protein SGT1 homolog A

protein SGT1 homolog B

protein SGT1 homolog

protein SGT1 homolog A-like

protein SGT1 homolog B

protein SGT1 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04141	Protein processing in endoplasmic reticulum	3
hvu04130	SNARE interactions in vesicular transport	2
hvu04626	Plant-pathogen interaction	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	5
bdi04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	5
osa04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	3
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath03040	Spliceosome	3
ath04144	Endocytosis	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2
bra04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03050	Proteasome	9
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	5
bra04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	6
vvi04626	Plant-pathogen interaction	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2
ppo03015	mRNA surveillance pathway	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04626	Plant-pathogen interaction	3
ppo04144	Endocytosis	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	5
mtr04141	Protein processing in endoplasmic reticulum	4
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr04626	Plant-pathogen interaction	4
mtr03040	Spliceosome	3
mtr04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi03060	Protein export	2
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	5
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	5
bna00053	Ascorbate and aldarate metabolism	2
bna01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	5
bna04626	Plant-pathogen interaction	4
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	4
bna03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta04141	Protein processing in endoplasmic reticulum	4
nta04144	Endocytosis	4
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta04141	Protein processing in endoplasmic reticulum	4
nta04144	Endocytosis	4
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	7
cre03040	Spliceosome	2
cre04144	Endocytosis	2
cre03018	RNA degradation	2

Expression

Expression pattern

Entrez Gene ID^*

100049034

123061535

123070173

123443917

100838478

4326682

100282745

103636097

8084854

826728

828457

100194421

100194420

100777554

101258374

103833887

103858599

103861407

100244083

18106438

7468358

25496516

11436240

107914611

107917913

107942356

106440530

106422380

106366226

102599444

102579484

102623505

107809968

107786122

5728516

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	2	1	2	3	1	3	1	2	2	3	3	2	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100049034 (tae-r.2 coexpression data)

Top 50 enrichment test to 100049034 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**