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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123080229   snRNA-activating protein complex subunit 
 tae-r.2   123063017   snRNA-activating protein complex subunit 
 tae-r.2   123071913   snRNA-activating protein complex subunit 
 hvu-r.1   123445175   snRNA-activating protein complex subunit 
 bdi-r.1   100840721   snRNA-activating protein complex subunit 
 osa-u.5   4324317   snRNA-activating protein complex subunit 
 zma-u.5   100275588   uncharacterized LOC100275588 
 sbi-r.1   8078716   snRNA-activating protein complex subunit 
 ath-u.5   SRD2   snRNA activating complex family protein 
 gma-u.5   100802470   snRNA-activating protein complex subunit 
 sly-u.5   101248718   snRNA-activating protein complex subunit 
 bra-r.6   103835310   snRNA-activating protein complex subunit 
 vvi-u.5   100854109   snRNA-activating protein complex subunit 
 ppo-u.5   7474040   snRNA-activating protein complex subunit 
 mtr-u.5   25501133   snRNA-activating protein complex subunit 
 mtr-u.5   25494348   snRNA-activating protein complex subunit 
 mtr-u.5   25483006   snRNA-activating protein complex subunit 
 ghi-r.1   107956983   snRNA-activating protein complex subunit 
 ghi-r.1   107903963   snRNA-activating protein complex subunit 
 bna-r.1   106361672   snRNA-activating protein complex subunit-like 
 bna-r.1   106389633   snRNA-activating protein complex subunit 
 sot-r.1   102584468   snRNA-activating protein complex subunit 
 cit-r.1   102627990   snRNA-activating protein complex subunit 
 nta-r.1   107785074   snRNA-activating protein complex subunit-like 
 nta-r.1   107814064   snRNA-activating protein complex subunit-like 
 cre-r.1   CHLRE_15g636650v5   uncharacterized protein 

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Top 50 coexpressed genes to 123080229 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123080229 (tae-r.2 coexpression data)

CoexMap"123080229"


taeLOC123080229 | Entrez gene ID : 123080229    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 1 1 1 1 1 3 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042795 [list] [network] snRNA transcription by RNA polymerase II  (9 genes)  IEA  
GO:0042796 [list] [network] snRNA transcription by RNA polymerase III  (9 genes)  IEA  
GO CC
GO:0019185 [list] [network] snRNA-activating protein complex  (9 genes)  IEA  
GO MF
GO:0003681 [list] [network] bent DNA binding  (3 genes)  IEA  
GO:0001006 [list] [network] RNA polymerase III type 3 promoter sequence-specific DNA binding  (15 genes)  IEA  
GO:0001046 [list] [network] core promoter sequence-specific DNA binding  (19 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (462 genes)  IEA  
Protein XP_044359065.1 [sequence] [blastp]
XP_044359066.1 [sequence] [blastp]
XP_044359067.1 [sequence] [blastp]
XP_044359068.1 [sequence] [blastp]
XP_044359069.1 [sequence] [blastp]
XP_044359070.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044359065.1)
nucl 10  (predict for XP_044359066.1)
nucl 9  (predict for XP_044359067.1)
nucl 10  (predict for XP_044359068.1)
nucl 10  (predict for XP_044359069.1)
nucl 10  (predict for XP_044359070.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_044359065.1)
other 6,  chlo 4  (predict for XP_044359066.1)
other 6,  chlo 5  (predict for XP_044359067.1)
other 6,  chlo 5  (predict for XP_044359068.1)
other 6,  chlo 5  (predict for XP_044359069.1)
other 6,  chlo 4  (predict for XP_044359070.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123080229
tae-r.2
for
123063017
tae-r.2
for
123071913
hvu-r.1
for
123445175
bdi-r.1
for
100840721
osa-u.5
for
4324317
zma-u.5
for
100275588
sbi-r.1
for
8078716
ath-u.5
for
SRD2
gma-u.5
for
100802470
sly-u.5
for
101248718
bra-r.6
for
103835310
vvi-u.5
for
100854109
ppo-u.5
for
7474040
mtr-u.5
for
25501133
mtr-u.5
for
25494348
mtr-u.5
for
25483006
ghi-r.1
for
107956983
ghi-r.1
for
107903963
bna-r.1
for
106361672
bna-r.1
for
106389633
sot-r.1
for
102584468
cit-r.1
for
102627990
nta-r.1
for
107785074
nta-r.1
for
107814064
cre-r.1
for
CHLRE_15g636650v5


Ortholog ID: 9813
Species tae tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr mtr mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123080229 LOC123063017 LOC123071913 LOC123445175 LOC100840721 LOC4324317 LOC100275588 LOC8078716 SRD2 LOC100802470 LOC101248718 LOC103835310 LOC100854109 LOC7474040 LOC25501133 LOC25494348 LOC25483006 LOC107956983 LOC107903963 LOC106361672 LOC106389633 LOC102584468 LOC102627990 LOC107785074 LOC107814064 CHLRE_15g636650v5
Function* snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit uncharacterized LOC100275588 snRNA-activating protein complex subunit snRNA activating complex family protein snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit-like snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit snRNA-activating protein complex subunit-like snRNA-activating protein complex subunit-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
bna04120 Ubiquitin mediated proteolysis 2
bna00410 beta-Alanine metabolism 2
bna00640 Propanoate metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04122 Sulfur relay system 2
sot00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123080229 123063017 123071913 123445175 100840721 4324317 100275588 8078716 839756 100802470 101248718 103835310 100854109 7474040 25501133 25494348 25483006 107956983 107903963 106361672 106389633 102584468 102627990 107785074 107814064 5726184
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