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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123104415   transcription factor 25 
 tae-r.2   123112686   transcription factor 25 
 tae-r.2   123122178   transcription factor 25 
 hvu-r.1   123399896   transcription factor 25 
 bdi-r.1   100831183   transcription factor 25 
 osa-u.5   4347571   uncharacterized LOC4347571 
 zma-u.5   100280382   uncharacterized LOC100280382 
 sbi-r.1   8063885   transcription factor 25 
 ath-u.5   AT2G46900   transcription factor-like protein 
 gma-u.5   100782875   transcription factor 25 
 gma-u.5   100782476   transcription factor 25 
 sly-u.5   101263439   uncharacterized LOC101263439 
 bra-r.6   103866422   transcription factor 25 
 vvi-u.5   100252305   uncharacterized LOC100252305 
 ppo-u.5   7487762   uncharacterized LOC7487762 
 ppo-u.5   7486827   uncharacterized LOC7486827 
 mtr-u.5   25500577   transcription factor 25 
 ghi-r.1   107945927   transcription factor 25 
 ghi-r.1   107923033   transcription factor 25 
 bna-r.1   106396943   transcription factor 25-like 
 bna-r.1   106416274   transcription factor 25-like 
 sot-r.1   102591529   transcription factor 25 
 cit-r.1   102611349   uncharacterized LOC102611349 
 nta-r.1   107792447   uncharacterized LOC107792447 
 nta-r.1   107830105   uncharacterized LOC107830105 
 cre-r.1   CHLRE_11g467639v5   uncharacterized protein 

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Top 50 coexpressed genes to 123104415 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123104415 (tae-r.2 coexpression data)

CoexMap"123104415"


taeLOC123104415 | Entrez gene ID : 123104415    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 2 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:1990112 [list] [network] RQC complex  (9 genes)  IEA  
GO MF
Protein XP_044382195.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_044382195.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_044382195.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123104415
tae-r.2
for
123112686
tae-r.2
for
123122178
hvu-r.1
for
123399896
bdi-r.1
for
100831183
osa-u.5
for
4347571
zma-u.5
for
100280382
sbi-r.1
for
8063885
ath-u.5
for
AT2G46900
gma-u.5
for
100782875
gma-u.5
for
100782476
sly-u.5
for
101263439
bra-r.6
for
103866422
vvi-u.5
for
100252305
ppo-u.5
for
7487762
ppo-u.5
for
7486827
mtr-u.5
for
25500577
ghi-r.1
for
107945927
ghi-r.1
for
107923033
bna-r.1
for
106396943
bna-r.1
for
106416274
sot-r.1
for
102591529
cit-r.1
for
102611349
nta-r.1
for
107792447
nta-r.1
for
107830105
cre-r.1
for
CHLRE_11g467639v5


Ortholog ID: 9446
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123104415 LOC123112686 LOC123122178 LOC123399896 LOC100831183 LOC4347571 LOC100280382 LOC8063885 AT2G46900 LOC100782875 LOC100782476 LOC101263439 LOC103866422 LOC100252305 LOC7487762 LOC7486827 LOC25500577 LOC107945927 LOC107923033 LOC106396943 LOC106416274 LOC102591529 LOC102611349 LOC107792447 LOC107830105 CHLRE_11g467639v5
Function* transcription factor 25 transcription factor 25 transcription factor 25 transcription factor 25 transcription factor 25 uncharacterized LOC4347571 uncharacterized LOC100280382 transcription factor 25 transcription factor-like protein transcription factor 25 transcription factor 25 uncharacterized LOC101263439 transcription factor 25 uncharacterized LOC100252305 uncharacterized LOC7487762 uncharacterized LOC7486827 transcription factor 25 transcription factor 25 transcription factor 25 transcription factor 25-like transcription factor 25-like transcription factor 25 uncharacterized LOC102611349 uncharacterized LOC107792447 uncharacterized LOC107830105 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03420 Nucleotide excision repair 3
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03050 Proteasome 3
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 8
bna00260 Glycine, serine and threonine metabolism 4
bna00460 Cyanoamino acid metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna00260 Glycine, serine and threonine metabolism 4
bna00460 Cyanoamino acid metabolism 4
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
cre02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123104415 123112686 123122178 123399896 100831183 4347571 100280382 8063885 819303 100782875 100782476 101263439 103866422 100252305 7487762 7486827 25500577 107945927 107923033 106396943 106416274 102591529 102611349 107792447 107830105 5724361
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