ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123123723	phospholipase D delta
tae-r.2	123112910	phospholipase D delta
tae-r.2	123122430	phospholipase D delta
hvu-r.1	123397779	phospholipase D delta-like
hvu-r.1	123400213	phospholipase D delta
bdi-r.1	100835966	phospholipase D delta
bdi-r.1	100840776	phospholipase D delta
osa-u.5	4342872	phospholipase D delta
osa-u.5	4347745	phospholipase D delta
zma-u.5	103647629	phospholipase D delta
zma-u.5	103626543	phospholipase D delta
zma-u.5	103647321	phospholipase D delta
sbi-r.1	8054988	phospholipase D delta
sbi-r.1	8054460	phospholipase D delta
ath-u.5	PLDDELTA	phospholipase D delta
gma-u.5	100789389	phospholipase D delta
gma-u.5	100779740	phospholipase D delta
gma-u.5	100795859	phospholipase D delta
sly-u.5	101246303	phospholipase D delta
sly-u.5	101248969	phospholipase D delta-like
bra-r.6	103834928	phospholipase D delta
bra-r.6	103873479	phospholipase D delta
vvi-u.5	100261019	phospholipase D delta-like
vvi-u.5	100252422	phospholipase D delta
vvi-u.5	100241982	phospholipase D delta
ppo-u.5	7468855	phospholipase D delta
ppo-u.5	7485622	phospholipase D delta
mtr-u.5	11430291	phospholipase D delta
mtr-u.5	11436144	phospholipase D delta
ghi-r.1	107917379	phospholipase D delta
ghi-r.1	107945790	phospholipase D delta-like
ghi-r.1	121204538	phospholipase D delta
bna-r.1	106351615	phospholipase D delta
bna-r.1	106347061	phospholipase D delta
bna-r.1	111200343	phospholipase D delta
sot-r.1	102593473	phospholipase D delta-like
sot-r.1	102583483	phospholipase D delta-like
cit-r.1	102622948	phospholipase D delta
cit-r.1	102618083	phospholipase D delta
nta-r.1	107780633	phospholipase D delta

Top 50 coexpressed genes to 123123723 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123123723 (tae-r.2 coexpression data)

CoexMap"123123723"

[Cytoscape]

Annotation

functional annotation

KEGG

taes00564 [list] [network] Glycerophospholipid metabolism (337 genes)

taes00565 [list] [network] Ether lipid metabolism (86 genes)

taes04144 [list] [network] Endocytosis (447 genes)

GO BP

GO:0046470 [list] [network] phosphatidylcholine metabolic process	(69 genes)	IEA
GO:0009395 [list] [network] phospholipid catabolic process	(74 genes)	IEA

GO CC

GO:0005886 [list] [network] plasma membrane

(2781 genes)

IEA

GO MF

GO:0004630 [list] [network] phospholipase D activity	(50 genes)	IEA
GO:0005509 [list] [network] calcium ion binding	(1095 genes)	IEA

Protein

XP_044400236.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, plas 1, cysk_nucl 1, vacu 1, E.R._vacu 1

(predict for XP_044400236.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044400236.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123123723	tae-r.2 for 123112910	tae-r.2 for 123122430	hvu-r.1 for 123397779	hvu-r.1 for 123400213	bdi-r.1 for 100835966	bdi-r.1 for 100840776	osa-u.5 for 4342872	osa-u.5 for 4347745	zma-u.5 for 103647629	zma-u.5 for 103626543	zma-u.5 for 103647321	sbi-r.1 for 8054988	sbi-r.1 for 8054460	ath-u.5 for PLDDELTA	gma-u.5 for 100789389	gma-u.5 for 100779740	gma-u.5 for 100795859	sly-u.5 for 101246303	sly-u.5 for 101248969	bra-r.6 for 103834928	bra-r.6 for 103873479	vvi-u.5 for 100261019	vvi-u.5 for 100252422	vvi-u.5 for 100241982	ppo-u.5 for 7468855	ppo-u.5 for 7485622	mtr-u.5 for 11430291	mtr-u.5 for 11436144	ghi-r.1 for 107917379	ghi-r.1 for 107945790	ghi-r.1 for 121204538	bna-r.1 for 106351615	bna-r.1 for 106347061	bna-r.1 for 111200343	sot-r.1 for 102593473	sot-r.1 for 102583483	cit-r.1 for 102622948	cit-r.1 for 102618083	nta-r.1 for 107780633

Ortholog

Ortholog ID: 1356

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

phospholipase D delta

phospholipase D delta-like

phospholipase D delta

phospholipase D family protein

phospholipase D delta

phospholipase D delta-like

phospholipase D delta

phospholipase D delta-like

phospholipase D delta

phospholipase D delta-like

phospholipase D delta

phospholipase D delta-like

phospholipase D delta

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	4
tae00564	Glycerophospholipid metabolism	2
tae00565	Ether lipid metabolism	2
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	3
tae00565	Ether lipid metabolism	3
tae04144	Endocytosis	3
tae00562	Inositol phosphate metabolism	2
tae04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	3
bdi00564	Glycerophospholipid metabolism	2
bdi00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4
sbi04144	Endocytosis	2
sbi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	3
ath04145	Phagosome	3
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00910	Nitrogen metabolism	2
gma01212	Fatty acid metabolism	2
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2
gma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	6
gma00230	Purine metabolism	2
gma00500	Starch and sucrose metabolism	2
gma00564	Glycerophospholipid metabolism	2
gma00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00906	Carotenoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00280	Valine, leucine and isoleucine degradation	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	4
mtr00564	Glycerophospholipid metabolism	3
mtr00565	Ether lipid metabolism	3
mtr04144	Endocytosis	3
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00330	Arginine and proline metabolism	2
ghi00360	Phenylalanine metabolism	2
ghi00380	Tryptophan metabolism	2
ghi00460	Cyanoamino acid metabolism	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	7
bna00565	Ether lipid metabolism	7
bna04144	Endocytosis	7
bna00260	Glycine, serine and threonine metabolism	3
bna01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	7
bna00565	Ether lipid metabolism	7
bna04144	Endocytosis	7
bna00270	Cysteine and methionine metabolism	2
bna00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00280	Valine, leucine and isoleucine degradation	2
cit00640	Propanoate metabolism	2
cit01210	2-Oxocarboxylic acid metabolism	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01250	Biosynthesis of nucleotide sugars	5
nta00541	Biosynthesis of various nucleotide sugars	3
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	2
nta00565	Ether lipid metabolism	2
nta04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

123123723

123121443

123397779

123400213

100835966

100840776

4342872

4347745

103626543

103647321

100217111

8054988

8054460

829733

100789389

100810824

100814486

101246303

101264680

101256058

103834928

103873479

103862436

100261019

100252422

100241982

7468855

7485622

11430291

11436144

121204538

107937835

106347061

111207705

102583483

102579042

102622948

102618083

107780633

107802388

The preparation time of this page was 0.2 [sec].


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	2	2	3	2	1	3	2	2	3	2	2	3	3	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123123723 (tae-r.2 coexpression data)

Top 50 enrichment test to 123123723 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**