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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123159298   protein RDM1 
 tae-r.2   123148350   protein RDM1 
 tae-r.2   123166330   protein RDM1 
 hvu-r.1   123412547   protein RDM1 
 bdi-r.1   100845060   protein RDM1 
 osa-u.5   9267494   protein RDM1 
 zma-u.5   100276351   uncharacterized LOC100276351 
 sbi-r.1   8083481   protein RDM1 
 ath-u.5   AT4G04614   uncharacterized protein 
 gma-u.5   100801123   uncharacterized LOC100801123 
 gma-u.5   100306236   uncharacterized LOC100306236 
 sly-u.5   101263244   uncharacterized LOC101263244 
 bra-r.6   103839825   UPF0690 protein C1orf52 homolog 
 vvi-u.5   100852813   uncharacterized LOC100852813 
 ppo-u.5   7464696   uncharacterized LOC7464696 
 mtr-u.5   11431273   uncharacterized LOC11431273 
 ghi-r.1   107946614   uncharacterized LOC107946614 
 ghi-r.1   107912937   uncharacterized LOC107912937 
 bna-r.1   106366896   UPF0690 protein C1orf52 homolog 
 bna-r.1   106418330   uncharacterized LOC106418330 
 sot-r.1   102595548   UPF0690 protein C1orf52 homolog 
 cit-r.1   102628740   uncharacterized LOC102628740 
 nta-r.1   107796069   uncharacterized LOC107796069 
 nta-r.1   107823529   uncharacterized LOC107823529 
 cre-r.1   CHLRE_17g717700v5   uncharacterized protein 

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Top 50 coexpressed genes to 123159298 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123159298 (tae-r.2 coexpression data)

CoexMap"123159298"


taeLOC123159298 | Entrez gene ID : 123159298    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (94 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
Protein XP_044433061.1 [sequence] [blastp]
XP_044433062.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_044433061.1)
nucl 5,  nucl_plas 4,  cyto_nucl 4,  cyto 1,  plas 1  (predict for XP_044433062.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044433061.1)
other 9  (predict for XP_044433062.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123159298
tae-r.2
for
123148350
tae-r.2
for
123166330
hvu-r.1
for
123412547
bdi-r.1
for
100845060
osa-u.5
for
9267494
zma-u.5
for
100276351
sbi-r.1
for
8083481
ath-u.5
for
AT4G04614
gma-u.5
for
100801123
gma-u.5
for
100306236
sly-u.5
for
101263244
bra-r.6
for
103839825
vvi-u.5
for
100852813
ppo-u.5
for
7464696
mtr-u.5
for
11431273
ghi-r.1
for
107946614
ghi-r.1
for
107912937
bna-r.1
for
106366896
bna-r.1
for
106418330
sot-r.1
for
102595548
cit-r.1
for
102628740
nta-r.1
for
107796069
nta-r.1
for
107823529
cre-r.1
for
CHLRE_17g717700v5


Ortholog ID: 10565
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123159298 LOC123148350 LOC123166330 LOC123412547 LOC100845060 LOC9267494 LOC100276351 LOC8083481 AT4G04614 LOC100801123 LOC100306236 LOC101263244 LOC103839825 LOC100852813 LOC7464696 LOC11431273 LOC107946614 LOC107912937 LOC106366896 LOC106418330 LOC102595548 LOC102628740 LOC107796069 LOC107823529 CHLRE_17g717700v5
Function* protein RDM1 protein RDM1 protein RDM1 protein RDM1 protein RDM1 protein RDM1 uncharacterized LOC100276351 protein RDM1 uncharacterized protein uncharacterized LOC100801123 uncharacterized LOC100306236 uncharacterized LOC101263244 UPF0690 protein C1orf52 homolog uncharacterized LOC100852813 uncharacterized LOC7464696 uncharacterized LOC11431273 uncharacterized LOC107946614 uncharacterized LOC107912937 UPF0690 protein C1orf52 homolog uncharacterized LOC106418330 UPF0690 protein C1orf52 homolog uncharacterized LOC102628740 uncharacterized LOC107796069 uncharacterized LOC107823529 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03040 Spliceosome 3
tae03083 Polycomb repressive complex 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae03040 Spliceosome 3
tae03083 Polycomb repressive complex 2
tae04141 Protein processing in endoplasmic reticulum 2
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 3
hvu03020 RNA polymerase 2
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 3
osa03040 Spliceosome 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
zma04120 Ubiquitin mediated proteolysis 2
zma03018 RNA degradation 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi04142 Lysosome 2
sbi04145 Phagosome 2
sbi04130 SNARE interactions in vesicular transport 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma04626 Plant-pathogen interaction 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta03420 Nucleotide excision repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123159298 123148350 123166330 123412547 100845060 9267494 100276351 8083481 3770064 100801123 100306236 101263244 103839825 100852813 7464696 11431273 107946614 107912937 106366896 106418330 102595548 102628740 107796069 107823529 5729277
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