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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   542963   40S ribosomal protein S3a 
 tae-r.2   123098376   40S ribosomal protein S3a 
 tae-r.2   542931   40S ribosomal protein S3a 
 hvu-r.1   123449416   40S ribosomal protein S3a-like 
 hvu-r.1   123428335   40S ribosomal protein S3a 
 bdi-r.1   100838833   40S ribosomal protein S3a 
 bdi-r.1   100830248   40S ribosomal protein S3a 
 bdi-r.1   100826559   40S ribosomal protein S3a 
 osa-u.5   4352048   small ribosomal subunit protein eS1-like 
 osa-u.5   4331966   40S ribosomal protein S3a-like 
 osa-u.5   4329042   small ribosomal subunit protein eS1-like 
 zma-u.5   100273118   40S ribosomal protein S3a-like 
 zma-u.5   100282717   40S ribosomal protein S3a 
 zma-u.5   100286214   40S ribosomal protein S3a 
 sbi-r.1   110431988   40S ribosomal protein S3a-like 
 sbi-r.1   8060638   40S ribosomal protein S3a 
 sbi-r.1   8060639   40S ribosomal protein S3a 
 ath-u.5   AT3G04840   Ribosomal protein S3Ae 
 ath-u.5   AT4G34670   Ribosomal protein S3Ae 
 gma-u.5   100813273   40S ribosomal protein S3a 
 gma-u.5   100818730   40S ribosomal protein S3a 
 gma-u.5   100808747   40S ribosomal protein S3a-like 
 sly-u.5   101252719   small ribosomal subunit protein eS1 
 sly-u.5   101260518   small ribosomal subunit protein eS1 
 sly-u.5   101268112   small ribosomal subunit protein eS1 
 bra-r.6   103849149   40S ribosomal protein S3a-2 
 bra-r.6   103835819   40S ribosomal protein S3a-2 
 bra-r.6   103834399   40S ribosomal protein S3a-2 
 vvi-u.5   100249434   40S ribosomal protein S3a-1 
 vvi-u.5   100232969   small ribosomal subunit protein eS1y-like 
 ppo-u.5   18098948   40S ribosomal protein S3a 
 ppo-u.5   7474179   40S ribosomal protein S3a-2 
 ppo-u.5   7473422   40S ribosomal protein S3a-2 
 mtr-u.5   25485157   40S ribosomal protein S3a 
 mtr-u.5   25488574   40S ribosomal protein S3a 
 mtr-u.5   11443151   40S ribosomal protein S3a 
 ghi-r.1   121214460   40S ribosomal protein S3a 
 ghi-r.1   107928496   40S ribosomal protein S3a 
 ghi-r.1   107929076   40S ribosomal protein S3a 
 bna-r.1   106433407   40S ribosomal protein S3a 
 bna-r.1   106439000   40S ribosomal protein S3a-2 
 bna-r.1   106453081   40S ribosomal protein S3a-2 
 sot-r.1   102577534   cyc07-like protein 
 sot-r.1   102577548   40S ribosomal protein S3a-like protein 
 sot-r.1   102590512   40S ribosomal protein S3a-like 
 cit-r.1   102626702   40S ribosomal protein S3a 
 cit-r.1   102619646   40S ribosomal protein S3a 
 nta-r.1   107809802   small ribosomal subunit protein eS1-like 
 nta-r.1   107765835   small ribosomal subunit protein eS1-like 
 nta-r.1   107779358   small ribosomal subunit protein eS1-like 
 cre-r.1   CHLRE_13g568650v5   ribosomal protein S3a 

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Top 50 coexpressed genes to 542963 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 542963 (tae-r.2 coexpression data)

CoexMap"542963"


taeLOC542963 | Entrez gene ID : 542963    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 2 3 3 3 3 2 3 3 3 2 3 3 3 3 3 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03010 [list] [network] Ribosome (7602 genes)
GO BP
GO:0006412 [list] [network] translation  (1629 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (1114 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1103 genes)  IEA  
Protein XP_044362453.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  plas 1,  nucl_plas 1  (predict for XP_044362453.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044362453.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
542963
tae-r.2
for
123098376
tae-r.2
for
542931
hvu-r.1
for
123449416
hvu-r.1
for
123428335
bdi-r.1
for
100838833
bdi-r.1
for
100830248
bdi-r.1
for
100826559
osa-u.5
for
4352048
osa-u.5
for
4331966
osa-u.5
for
4329042
zma-u.5
for
100273118
zma-u.5
for
100282717
zma-u.5
for
100286214
sbi-r.1
for
110431988
sbi-r.1
for
8060638
sbi-r.1
for
8060639
ath-u.5
for
AT3G04840
ath-u.5
for
AT4G34670
gma-u.5
for
100813273
gma-u.5
for
100818730
gma-u.5
for
100808747
sly-u.5
for
101252719
sly-u.5
for
101260518
sly-u.5
for
101268112
bra-r.6
for
103849149
bra-r.6
for
103835819
bra-r.6
for
103834399
vvi-u.5
for
100249434
vvi-u.5
for
100232969
ppo-u.5
for
18098948
ppo-u.5
for
7474179
ppo-u.5
for
7473422
mtr-u.5
for
25485157
mtr-u.5
for
25488574
mtr-u.5
for
11443151
ghi-r.1
for
121214460
ghi-r.1
for
107928496
ghi-r.1
for
107929076
bna-r.1
for
106433407
bna-r.1
for
106439000
bna-r.1
for
106453081
sot-r.1
for
102577534
sot-r.1
for
102577548
sot-r.1
for
102590512
cit-r.1
for
102626702
cit-r.1
for
102619646
nta-r.1
for
107809802
nta-r.1
for
107765835
nta-r.1
for
107779358
cre-r.1
for
CHLRE_13g568650v5


Ortholog ID: 1619
Species tae tae tae hvu hvu bdi bdi bdi osa osa osa zma zma zma sbi sbi sbi ath ath gma gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre
Symbol LOC542963 LOC123098376 LOC542931 LOC123449416 LOC123428335 LOC100838833 LOC100830248 LOC104582446 LOC4352048 LOC4331966 LOC4329042 LOC100282717 LOC100286214 LOC103639467 LOC110431988 LOC8060638 LOC8060639 AT3G04840 AT4G34670 LOC100818730 LOC100808747 LOC100781570 LOC101252719 LOC101260518 LOC101268112 LOC103834399 LOC103249169 LOC103862366 LOC100249434 LOC100232969 LOC18098948 LOC7474179 LOC7473422 LOC25485157 LOC25488574 LOC11443151 LOC107928496 LOC107928498 LOC107891915 LOC106439000 LOC111214350 LOC106388814 LOC102577534 LOC102577548 LOC102590512 LOC102626702 LOC102619646 LOC107809802 LOC107779358 LOC107804483 CHLRE_13g568650v5
Function* 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a-like 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a small ribosomal subunit protein eS1-like 40S ribosomal protein S3a-like small ribosomal subunit protein eS1-like 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a-like 40S ribosomal protein S3a 40S ribosomal protein S3a Ribosomal protein S3Ae Ribosomal protein S3Ae 40S ribosomal protein S3a 40S ribosomal protein S3a-like 40S ribosomal protein S3a small ribosomal subunit protein eS1 small ribosomal subunit protein eS1 small ribosomal subunit protein eS1 40S ribosomal protein S3a-2 40S ribosomal protein S3a-like 40S ribosomal protein S3a-2 40S ribosomal protein S3a-1 small ribosomal subunit protein eS1y-like 40S ribosomal protein S3a 40S ribosomal protein S3a-2 40S ribosomal protein S3a-2 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a 40S ribosomal protein S3a-2 40S ribosomal protein S3a-2-like 40S ribosomal protein S3a-2 cyc07-like protein 40S ribosomal protein S3a-like protein 40S ribosomal protein S3a-like 40S ribosomal protein S3a 40S ribosomal protein S3a small ribosomal subunit protein eS1-like small ribosomal subunit protein eS1-like small ribosomal subunit protein eS1-like ribosomal protein S3a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 4
gma03010 Ribosome 3
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
sot03020 RNA polymerase 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 542963 123098376 542931 123449416 123428335 100838833 100830248 104582446 4352048 4331966 4329042 100282717 100286214 103639467 110431988 8060638 8060639 819644 829619 100818730 100808747 100781570 101252719 101260518 101268112 103834399 103249169 103862366 100249434 100232969 18098948 7474179 7473422 25485157 25488574 11443151 107928496 107928498 107891915 106439000 111214350 106388814 102577534 102577548 102590512 102626702 102619646 107809802 107779358 107804483 5719095
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