Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-m.5   100257533   uncharacterized LOC100257533 
 vvi-u.5   100257533   uncharacterized LOC100257533 
 vvi-r.5   100257533   uncharacterized LOC100257533 
 ath-u.5   AT2G02570   nucleic acid binding/RNA binding protein 
 gma-u.5   100795070   survival of motor neuron-related-splicing factor 30 
 gma-u.5   100807248   survival of motor neuron-related-splicing factor 30 
 bra-r.6   103853985   survival of motor neuron-related-splicing factor 30 
 bra-r.6   103827514   uncharacterized LOC103827514 
 ppo-u.5   18098370   uncharacterized LOC18098370 
 mtr-u.5   25494370   survival of motor neuron-related-splicing factor 30 
 ghi-r.1   107962291   survival of motor neuron-related-splicing factor 30 
 ghi-r.1   107902055   survival of motor neuron-related-splicing factor 30 
 bna-r.1   106443629   uncharacterized LOC106443629 
 bna-r.1   106411202   uncharacterized LOC106411202 
 bna-r.1   BNAA06G34090D   uncharacterized BNAA06G34090D 
 cit-r.1   102621258   uncharacterized LOC102621258 
 sly-u.5   101256129   tudor domain-containing protein 
 sot-r.1   102603397   survival of motor neuron-related-splicing factor 30 
 nta-r.1   107765141   uncharacterized LOC107765141 
 nta-r.1   107804027   uncharacterized LOC107804027 
 osa-u.5   4344474   uncharacterized LOC4344474 
 zma-u.5   103653151   uncharacterized LOC103653151 
 tae-r.2   123165310   survival of motor neuron-related-splicing factor 30 
 tae-r.2   123157819   survival of motor neuron-related-splicing factor 30 
 tae-r.2   123147611   survival of motor neuron-related-splicing factor 30 
 hvu-r.1   123407635   survival of motor neuron-related-splicing factor 30 
 sbi-r.1   8068537   survival of motor neuron-related-splicing factor 30 
 bdi-r.1   100831866   survival of motor neuron-related-splicing factor 30 
 cre-r.1   CHLRE_02g106550v5   uncharacterized protein 

close


Top 50 coexpressed genes to 100257533 (vvi-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100257533 (vvi-m.5 coexpression data)

CoexMap"100257533"


vviLOC100257533 | Entrez gene ID : 100257533      
Species vvi ath gma bra ppo mtr ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 1 1 2 3 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG vvi03040 [list] [network] Spliceosome (236 genes)
GO BP
GO:0006397 [list] [network] mRNA processing  (186 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2597 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4496 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
Protein XP_002269518.2 [sequence] [blastp]
XP_059596984.1 [sequence] [blastp]
XP_059596985.1 [sequence] [blastp]
XP_059596987.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002269518.2)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_059596984.1)
nucl 7,  cyto 2  (predict for XP_059596985.1)
nucl 7,  cyto 2  (predict for XP_059596987.1)
Subcellular
localization
TargetP
other 8  (predict for XP_002269518.2)
other 5,  scret 3  (predict for XP_059596984.1)
scret 8  (predict for XP_059596985.1)
scret 8  (predict for XP_059596987.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-m.5
for
100257533
vvi-u.5
for
100257533
vvi-r.5
for
100257533
ath-u.5
for
AT2G02570
gma-u.5
for
100795070
gma-u.5
for
100807248
bra-r.6
for
103853985
bra-r.6
for
103827514
ppo-u.5
for
18098370
mtr-u.5
for
25494370
ghi-r.1
for
107962291
ghi-r.1
for
107902055
bna-r.1
for
106443629
bna-r.1
for
106411202
bna-r.1
for
BNAA06G34090D
cit-r.1
for
102621258
sly-u.5
for
101256129
sot-r.1
for
102603397
nta-r.1
for
107765141
nta-r.1
for
107804027
osa-u.5
for
4344474
zma-u.5
for
103653151
tae-r.2
for
123165310
tae-r.2
for
123157819
tae-r.2
for
123147611
hvu-r.1
for
123407635
sbi-r.1
for
8068537
bdi-r.1
for
100831866
cre-r.1
for
CHLRE_02g106550v5


Ortholog ID: 8861
Species vvi ath gma gma bra bra ppo mtr ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100257533 AT2G02570 LOC100795070 LOC100807248 LOC103853985 LOC103827514 LOC18098370 LOC25494370 LOC107962291 LOC107902055 LOC106443629 LOC106411202 BNAA06G34090D LOC102621258 LOC101256129 LOC102603397 LOC107765141 LOC107804027 LOC4344474 LOC103653151 LOC123165310 LOC123157819 LOC123147611 LOC123407635 LOC8068537 LOC100831866 CHLRE_02g106550v5
Function* uncharacterized LOC100257533 nucleic acid binding/RNA binding protein survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 uncharacterized LOC103827514 uncharacterized LOC18098370 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 uncharacterized LOC106443629 uncharacterized LOC106411202 uncharacterized BNAA06G34090D uncharacterized LOC102621258 tudor domain-containing protein survival of motor neuron-related-splicing factor 30 uncharacterized LOC107765141 uncharacterized LOC107804027 uncharacterized LOC4344474 uncharacterized LOC103653151 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 survival of motor neuron-related-splicing factor 30 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03010 Ribosome 3
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 4
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03015 mRNA surveillance pathway 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr04626 Plant-pathogen interaction 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
sbi04144 Endocytosis 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100257533 814787 100795070 100807248 103853985 103827514 18098370 25494370 107962291 107902055 106443629 106411202 106369341 102621258 101256129 102603397 107765141 107804027 4344474 103653151 123165310 123157819 123147611 123407635 8068537 100831866 5725298
The preparation time of this page was 0.2 [sec].