ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
vvi-m.5	100257563	uncharacterized LOC100257563
vvi-u.5	100257563	uncharacterized LOC100257563
vvi-r.5	100257563	uncharacterized LOC100257563
vvi-u.5	100250143	uncharacterized LOC100250143
ath-u.5	AT5G05570	transducin family protein / WD-40 repeat family protein
gma-u.5	100779801	uncharacterized LOC100779801
gma-u.5	100777534	uncharacterized LOC100777534
gma-u.5	100776508	uncharacterized LOC100776508
bra-r.6	103850590	uncharacterized LOC103850590
bra-r.6	103846904	uncharacterized LOC103846904
ppo-u.5	7488026	uncharacterized LOC7488026
ppo-u.5	7466079	uncharacterized LOC7466079
ppo-u.5	7474429	uncharacterized LOC7474429
mtr-u.5	25498768	uncharacterized LOC25498768
mtr-u.5	11429483	lethal(2) giant larvae protein homolog SRO77
ghi-r.1	107955174	uncharacterized LOC107955174
ghi-r.1	107948942	uncharacterized LOC107948942
ghi-r.1	107899543	uncharacterized LOC107899543
bna-r.1	125600772	uncharacterized LOC125600772
bna-r.1	106440684	uncharacterized LOC106440684
bna-r.1	BNAANNG01390D	uncharacterized BNAANNG01390D
cit-r.1	102617119	uncharacterized LOC102617119
cit-r.1	102612279	uncharacterized LOC102612279
sly-u.5	101264935	lethal(2) giant larvae protein homolog SRO77-like
sly-u.5	101248608	uncharacterized LOC101248608
sot-r.1	102587909	uncharacterized LOC102587909
sot-r.1	102596591	uncharacterized LOC102596591
nta-r.1	107781411	uncharacterized LOC107781411
nta-r.1	107829771	uncharacterized LOC107829771
nta-r.1	107823585	uncharacterized LOC107823585
osa-u.5	4344388	uncharacterized LOC4344388
zma-u.5	103633604	transducin family protein / WD-40 repeat family protein
zma-u.5	103632640	transducin family protein / WD-40 repeat family protein
tae-r.2	123043515	syntaxin-binding protein 5-like
tae-r.2	123051384	uncharacterized LOC123051384
tae-r.2	123145100	uncharacterized LOC123145100
hvu-r.1	123424596	uncharacterized LOC123424596
sbi-r.1	8077524	uncharacterized LOC8077524
bdi-r.1	100837017	uncharacterized LOC100837017

Top 50 coexpressed genes to 100257563 (vvi-m.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100257563 (vvi-m.5 coexpression data)

CoexMap"100257563"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0017157 [list] [network] regulation of exocytosis

(8 genes)

IEA

GO CC

GO:0005886 [list] [network] plasma membrane	(987 genes)	IEA
GO:0005737 [list] [network] cytoplasm	(4496 genes)	IEA

GO MF

GO:0045159 [list] [network] myosin II binding	(3 genes)	IEA
GO:0019905 [list] [network] syntaxin binding	(12 genes)	IEA
GO:0005096 [list] [network] GTPase activator activity	(51 genes)	IEA

Protein

XP_010653303.1 [sequence] [blastp]
XP_019077236.1 [sequence] [blastp]
XP_059594907.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, mito 3, chlo_mito 2, cysk_nucl 2, nucl_plas 2	(predict for XP_010653303.1)
nucl 4, mito 3, chlo 1, cyto_mito 1	(predict for XP_019077236.1)
cyto 4, nucl 4, chlo 1, plas 1, vacu 1	(predict for XP_059594907.1)

Subcellular
localization
TargetP

mito 6, other 3	(predict for XP_010653303.1)
mito 6, other 3	(predict for XP_019077236.1)
other 8	(predict for XP_059594907.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-m.5 for 100257563	vvi-u.5 for 100257563	vvi-r.5 for 100257563	vvi-u.5 for 100250143	ath-u.5 for AT5G05570	gma-u.5 for 100779801	gma-u.5 for 100777534	gma-u.5 for 100776508	bra-r.6 for 103850590	bra-r.6 for 103846904	ppo-u.5 for 7488026	ppo-u.5 for 7466079	ppo-u.5 for 7474429	mtr-u.5 for 25498768	mtr-u.5 for 11429483	ghi-r.1 for 107955174	ghi-r.1 for 107948942	ghi-r.1 for 107899543	bna-r.1 for 125600772	bna-r.1 for 106440684	bna-r.1 for BNAANNG01390D	cit-r.1 for 102617119	cit-r.1 for 102612279	sly-u.5 for 101264935	sly-u.5 for 101248608	sot-r.1 for 102587909	sot-r.1 for 102596591	nta-r.1 for 107781411	nta-r.1 for 107829771	nta-r.1 for 107823585	osa-u.5 for 4344388	zma-u.5 for 103633604	zma-u.5 for 103632640	tae-r.2 for 123043515	tae-r.2 for 123051384	tae-r.2 for 123145100	hvu-r.1 for 123424596	sbi-r.1 for 8077524	bdi-r.1 for 100837017

Ortholog

Ortholog ID: 4779

Species

vvi

ath

gma

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC100257563

uncharacterized LOC100250143

transducin family protein / WD-40 repeat family protein

uncharacterized LOC100779801

uncharacterized LOC100777534

uncharacterized LOC100776508

uncharacterized LOC103850590

uncharacterized LOC103846904

uncharacterized LOC7488026

uncharacterized LOC7466079

uncharacterized LOC7474429

uncharacterized LOC25498768

lethal(2) giant larvae protein homolog SRO77

uncharacterized LOC107955174

uncharacterized LOC107948942

uncharacterized LOC107899543

uncharacterized LOC125600772

uncharacterized BNAANNG01390D

uncharacterized LOC106419370

uncharacterized LOC102617119

uncharacterized LOC102612279

lethal(2) giant larvae protein homolog SRO77-like

uncharacterized LOC101248608

uncharacterized LOC102587909

uncharacterized LOC102596591

uncharacterized LOC107781411

uncharacterized LOC107829771

uncharacterized LOC142164584

uncharacterized LOC4344388

transducin family protein / WD-40 repeat family protein

uncharacterized LOC123051384

uncharacterized LOC123145100

uncharacterized LOC123187332

uncharacterized LOC123424596

uncharacterized LOC8077524

uncharacterized LOC100837017

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	3
vvi04142	Lysosome	2
vvi04382	Cornified envelope formation	2
vvi00020	Citrate cycle (TCA cycle)	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	2
vvi03410	Base excision repair	2
vvi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03420	Nucleotide excision repair	2
gma04136	Autophagy - other	2
gma04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00410	beta-Alanine metabolism	3
gma00770	Pantothenate and CoA biosynthesis	3
gma01240	Biosynthesis of cofactors	3
gma03013	Nucleocytoplasmic transport	2
gma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	4
ghi04070	Phosphatidylinositol signaling system	4
ghi04145	Phagosome	4
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00590	Arachidonic acid metabolism	2
nta00790	Folate biosynthesis	2
nta03018	RNA degradation	2
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00590	Arachidonic acid metabolism	2
nta00790	Folate biosynthesis	2
nta00906	Carotenoid biosynthesis	2
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	6
tae04144	Endocytosis	6
tae05100	Bacterial invasion of epithelial cells	6
tae03083	Polycomb repressive complex	3
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	4
tae03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

100257563

100250143

830440

100779801

100777534

100776508

103850590

103846904

7488026

7466079

7474429

25498768

11429483

107955174

107948942

107899543

125600772

106422761

106419370

102617119

102612279

101264935

101248608

102587909

102596591

107781411

107829771

142164584

4344388

103633604

103632640

123051384

123145100

123187332

123424596

8077524

100837017

The preparation time of this page was 0.2 [sec].


Species	vvi	ath	gma	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	3	2	3	2	3	3	2	2	2	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100257563 (vvi-m.5 coexpression data)

Top 50 enrichment test to 100257563 (vvi-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**