ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-m.5	100257837	uncharacterized LOC100257837
vvi-u.5	100257837	uncharacterized LOC100257837
vvi-r.5	100257837	uncharacterized LOC100257837
vvi-u.5	100252690	uncharacterized LOC100252690
ath-u.5	AT3G19990	E3 ubiquitin-protein ligase
bra-r.6	103836777	uncharacterized LOC103836777
ppo-u.5	7465588	uncharacterized LOC7465588
mtr-u.5	25481012	uncharacterized LOC25481012
mtr-u.5	25480955	uncharacterized LOC25480955
mtr-u.5	120580559	uncharacterized LOC120580559
ghi-r.1	107920535	uncharacterized LOC107920535
ghi-r.1	107894072	uncharacterized LOC107894072
bna-r.1	125608846	uncharacterized LOC125608846
bna-r.1	106428848	uncharacterized LOC106428848
bna-r.1	106402082	uncharacterized LOC106402082
cit-r.1	102616933	uncharacterized LOC102616933
sly-u.5	101256540	uncharacterized LOC101256540
sot-r.1	102596661	uncharacterized LOC102596661
nta-r.1	107830735	uncharacterized LOC107830735
nta-r.1	107777802	uncharacterized LOC107777802
osa-u.5	4331231	uncharacterized LOC4331231
osa-u.5	107276217	uncharacterized LOC107276217
zma-u.5	100193035	uncharacterized LOC100193035
tae-r.2	123084718	uncharacterized LOC123084718
tae-r.2	123093380	uncharacterized LOC123093380
tae-r.2	123098652	uncharacterized LOC123098652
hvu-r.1	123447103	uncharacterized LOC123447103
sbi-r.1	8084452	uncharacterized LOC8084452
sbi-r.1	8055352	uncharacterized LOC8055352
bdi-r.1	100845551	uncharacterized LOC100845551
bdi-r.1	100827583	uncharacterized LOC100827583
cre-r.1	CHLRE_16g671500v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4232 genes)

IEA

Protein

XP_002268202.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, E.R. 3, cyto 2, E.R._vacu 2

(predict for XP_002268202.1)

Subcellular
localization
TargetP

other 3, chlo 3

(predict for XP_002268202.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-m.5 for 100257837	vvi-u.5 for 100257837	vvi-r.5 for 100257837	vvi-u.5 for 100252690	ath-u.5 for AT3G19990	bra-r.6 for 103836777	ppo-u.5 for 7465588	mtr-u.5 for 25481012	mtr-u.5 for 25480955	mtr-u.5 for 120580559	ghi-r.1 for 107920535	ghi-r.1 for 107894072	bna-r.1 for 125608846	bna-r.1 for 106428848	bna-r.1 for 106402082	cit-r.1 for 102616933	sly-u.5 for 101256540	sot-r.1 for 102596661	nta-r.1 for 107830735	nta-r.1 for 107777802	osa-u.5 for 4331231	osa-u.5 for 107276217	zma-u.5 for 100193035	tae-r.2 for 123084718	tae-r.2 for 123093380	tae-r.2 for 123098652	hvu-r.1 for 123447103	sbi-r.1 for 8084452	sbi-r.1 for 8055352	bdi-r.1 for 100845551	bdi-r.1 for 100827583	cre-r.1 for CHLRE_16g671500v5

Ortholog

Ortholog ID: 5308

Species

vvi

ath

bra

ppo

mtr

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100257837

uncharacterized LOC100252690

E3 ubiquitin-protein ligase

uncharacterized LOC103836777

uncharacterized LOC7465588

uncharacterized LOC25481012

uncharacterized LOC25480955

uncharacterized LOC120580559

uncharacterized LOC107920535

uncharacterized LOC107894072

uncharacterized LOC125608846

uncharacterized LOC106402082

uncharacterized LOC106346255

uncharacterized LOC102616933

uncharacterized LOC101256540

uncharacterized LOC102596661

uncharacterized LOC107830735

uncharacterized LOC107777802

uncharacterized LOC4331231

uncharacterized LOC107276217

uncharacterized LOC100193035

uncharacterized LOC123098652

uncharacterized LOC123129147

uncharacterized LOC123146317

uncharacterized LOC123447103

uncharacterized LOC8084452

uncharacterized LOC8055352

uncharacterized LOC100845551

uncharacterized LOC100827583

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00240	Pyrimidine metabolism	2
bra00410	beta-Alanine metabolism	2
bra00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00071	Fatty acid degradation	3
ppo00280	Valine, leucine and isoleucine degradation	3
ppo00330	Arginine and proline metabolism	3
ppo00561	Glycerolipid metabolism	3
ppo01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	2
nta00640	Propanoate metabolism	2
nta00785	Lipoic acid metabolism	2
nta01210	2-Oxocarboxylic acid metabolism	2
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	2
nta00640	Propanoate metabolism	2
nta00785	Lipoic acid metabolism	2
nta01210	2-Oxocarboxylic acid metabolism	2
nta00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa00230	Purine metabolism	2
osa01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00280	Valine, leucine and isoleucine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00240	Pyrimidine metabolism	2
sbi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00280	Valine, leucine and isoleucine degradation	6
sbi01210	2-Oxocarboxylic acid metabolism	4
sbi00410	beta-Alanine metabolism	3
sbi00020	Citrate cycle (TCA cycle)	3
sbi01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	3

Expression

Expression pattern

Entrez Gene ID^*

100257837

100252690

821537

103836777

7465588

25481012

25480955

120580559

107920535

107894072

125608846

106402082

106346255

102616933

101256540

102596661

107830735

107777802

4331231

107276217

100193035

123098652

123129147

123146317

123447103

8084452

8055352

100845551

100827583

5717704

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100257837 (vvi-m.5 coexpression data)

Top 50 enrichment test to 100257837 (vvi-m.5 coexpression data)


Species	vvi	ath	bra	ppo	mtr	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre	gma
Paralog	4	1	1	1	3	2	3	1	1	1	2	2	1	3	1	2	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100257837 (vvi-m.5 coexpression data)

Top 50 enrichment test to 100257837 (vvi-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**