ATTED-II : GeneCoexpression result

Species	Gene	Description
vvi-m.5	100267043	uncharacterized LOC100267043
vvi-u.5	100267043	uncharacterized LOC100267043
vvi-r.5	100267043	uncharacterized LOC100267043
ath-u.5	AT4G00530	UvrABC system protein A
ath-u.5	AT1G01725	adenylosuccinate synthetase
gma-u.5	100804482	uncharacterized LOC100804482
gma-u.5	100306571	uncharacterized LOC100306571
ppo-u.5	7464927	uncharacterized LOC7464927
mtr-u.5	25500890	uncharacterized LOC25500890
ghi-r.1	121202932	uncharacterized LOC121202932
ghi-r.1	107900887	uncharacterized LOC107900887
bna-r.1	111206446	uncharacterized LOC111206446
cit-r.1	102620231	hypothetical protein
cit-r.1	127901091	uncharacterized LOC127901091
sot-r.1	102604474	uncharacterized LOC102604474
zma-u.5	109945510	uncharacterized LOC109945510
sbi-r.1	110437042	uncharacterized LOC110437042

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_002272715.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 5, nucl 3, cyto_nucl 2, cyto_mito 2, mito_plas 2

(predict for XP_002272715.1)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_002272715.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	vvi-m.5 for 100267043	vvi-u.5 for 100267043	vvi-r.5 for 100267043	ath-u.5 for AT4G00530	ath-u.5 for AT1G01725	gma-u.5 for 100804482	gma-u.5 for 100306571	ppo-u.5 for 7464927	mtr-u.5 for 25500890	ghi-r.1 for 121202932	ghi-r.1 for 107900887	bna-r.1 for 111206446	cit-r.1 for 102620231	cit-r.1 for 127901091	sot-r.1 for 102604474	zma-u.5 for 109945510	sbi-r.1 for 110437042

Ortholog

Ortholog ID: 13178

Species

vvi

ath

gma

ppo

mtr

ghi

bna

cit

sot

zma

sbi

Symbol

Function^*

uncharacterized LOC100267043

UvrABC system protein A

adenylosuccinate synthetase

uncharacterized LOC100804482

uncharacterized LOC100306571

uncharacterized LOC7464927

uncharacterized LOC25500890

uncharacterized LOC121202932

uncharacterized LOC107900887

uncharacterized LOC111206446

hypothetical protein

uncharacterized LOC127901091

uncharacterized LOC102604474

uncharacterized LOC109945510

uncharacterized LOC110437042

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	4
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2
mtr00562	Inositol phosphate metabolism	2
mtr04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00730	Thiamine metabolism	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00730	Thiamine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04136	Autophagy - other	3
sot03272	Virion - Hepatitis viruses	2
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	10
zma03040	Spliceosome	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	6

Expression

Expression pattern

Entrez Gene ID^*

100267043

827975

839271

100804482

100306571

7464927

25500890

121202932

107900887

111206446

102620231

127901091

102604474

109945510

110437042

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100267043 (vvi-m.5 coexpression data)

Top 50 enrichment test to 100267043 (vvi-m.5 coexpression data)


Species	vvi	ath	gma	ppo	mtr	ghi	bna	cit	sot	zma	sbi	osa	sly	bra	tae	hvu	cre	nta	bdi
Paralog	3	2	2	1	1	2	1	2	1	1	1	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100267043 (vvi-m.5 coexpression data)

Top 50 enrichment test to 100267043 (vvi-m.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**