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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-m.5  100267901  pentatricopeptide repeat-containing protein At4g33170 
 vvi-u.5  100267901  pentatricopeptide repeat-containing protein At4g33170 
 vvi-r.5  100267901  pentatricopeptide repeat-containing protein At4g33170 
 ath-u.5  AT4G33170  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  102661570  pentatricopeptide repeat-containing protein At4g33170 
 gma-u.5  102666538  pentatricopeptide repeat-containing protein At4g33170 
 bra-r.6  103849612  pentatricopeptide repeat-containing protein At4g33170 
 bra-r.6  103834497  pentatricopeptide repeat-containing protein At4g33170 
 mtr-u.5  11442245  pentatricopeptide repeat-containing protein At4g33170 
 cit-r.1  102623149  pentatricopeptide repeat-containing protein At4g33170 

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Top 50 coexpressed genes to 100267901 (vvi-m.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100267901 (vvi-m.5 coexpression data)

CoexMap"100267901"


vviLOC100267901 | Entrez gene ID : 100267901
Species vvi ath gma bra mtr cit sbi osa sot sly tae bna hvu ppo ghi zma cre nta bdi
Paralog 3 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (500 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (811 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1286 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_019074813.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for XP_019074813.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_019074813.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

vvi-m.5
for
100267901


vvi-u.5
for
100267901


vvi-r.5
for
100267901


ath-u.5
for
AT4G33170


gma-u.5
for
102661570


gma-u.5
for
102666538


bra-r.6
for
103849612


bra-r.6
for
103834497


mtr-u.5
for
11442245


cit-r.1
for
102623149



Ortholog ID: 14368
Species vvi ath gma gma bra bra mtr cit
Symbol LOC100267901 AT4G33170 LOC102661570 LOC102666538 LOC103849612 LOC103834497 LOC11442245 LOC102623149
Function* pentatricopeptide repeat-containing protein At4g33170 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170 pentatricopeptide repeat-containing protein At4g33170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100267901 829454 102661570 102666538 103849612 103834497 11442245 102623149
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