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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   LCR69   low-molecular-weight cysteine-rich 69 
 ath-u.5   LCR69   low-molecular-weight cysteine-rich 69 
 ath-r.7   LCR69   low-molecular-weight cysteine-rich 69 
 ath-m.9   LCR69   low-molecular-weight cysteine-rich 69 
 ath-e.2   LCR69   low-molecular-weight cysteine-rich 69 
 ath-m.4.hor   LCR69   low-molecular-weight cysteine-rich 69 
 ath-m.4.lig   LCR69   low-molecular-weight cysteine-rich 69 
 ath-m.4.str   LCR69   low-molecular-weight cysteine-rich 69 
 ath-m.4.tis   LCR69   low-molecular-weight cysteine-rich 69 
 ath-u.5   PDF2.5   Scorpion toxin-like knottin superfamily protein 
 ath-u.5   PDF2.1   Scorpion toxin-like knottin superfamily protein 
 ath-u.5   LCR68   low-molecular-weight cysteine-rich 68 
 bra-r.6   103249170   defensin-like protein 2 
 bra-r.6   103839450   defensin-like protein 1 
 bna-r.1   111214169   defensin-like protein 1 
 ghi-r.1   121216273   defensin-like protein 1 
 ghi-r.1   107890541   defensin-like protein 1 
 cit-r.1   102611353   defensin Ec-AMP-D1 
 cit-r.1   102630283   defensin-like protein 1 
 gma-u.5   100788332   defensin Ec-AMP-D2 
 gma-u.5   100306228   defensin-like protein 1 
 vvi-u.5   100242603   defensin Ec-AMP-D2 
 vvi-u.5   100252765   defensin-like protein 1 
 vvi-u.5   100260466   defensin-like protein 1 
 ppo-u.5   7465901   defensin-like protein 1 
 ppo-u.5   7465900   defensin-like protein 1 
 mtr-u.5   11425256   defensin Ec-AMP-D1 
 mtr-u.5   11421732   defensin Ec-AMP-D1 
 sly-u.5   DEFL1   defensin-like protein 
 sly-u.5   101263528   defensin-like protein 1 
 sly-u.5   101263224   defensin-like protein 
 sot-r.1   102603276   defensin J1-2 
 nta-r.1   107775109   defensin-like protein P322 
 nta-r.1   107822324   defensin-like protein 1 
 osa-u.5   4331501   defensin-like protein 
 osa-u.5   9271118   defensin Tk-AMP-D1.1-like 
 zma-u.5   103646754   defensin Ec-AMP-D1 
 zma-u.5   100280590   flower-specific gamma-thionin 
 zma-u.5   100281986   uncharacterized LOC100281986 
 tae-r.2   123108298   defensin Ec-AMP-D2 
 tae-r.2   123112873   defensin-like protein 1 
 hvu-r.1   123447328   defensin Ec-AMP-D2-like 
 hvu-r.1   123447327   defensin-like protein 1 
 bdi-r.1   100831511   defensin Ec-AMP-D1 
 bdi-r.1   100833908   defensin-like protein 3 

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Top 50 coexpressed genes to LCR69 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LCR69 (ath-m.4.bio coexpression data)

CoexMap"814741"


athLCR69 | Entrez gene ID : 814741      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu bdi cre sbi
Paralog 12 2 1 2 2 2 3 2 2 3 1 2 2 3 2 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006952 [list] [network] defense response  (1016 genes)  ISS  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (504 genes)  HDA IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_178319.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  vacu 3  (predict for NP_178319.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_178319.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
LCR69
ath-u.5
for
LCR69
ath-r.7
for
LCR69
ath-m.9
for
LCR69
ath-e.2
for
LCR69
ath-m.4.hor
for
LCR69
ath-m.4.lig
for
LCR69
ath-m.4.str
for
LCR69
ath-m.4.tis
for
LCR69
ath-u.5
for
PDF2.5
ath-u.5
for
PDF2.1
ath-u.5
for
LCR68
bra-r.6
for
103249170
bra-r.6
for
103839450
bna-r.1
for
111214169
ghi-r.1
for
121216273
ghi-r.1
for
107890541
cit-r.1
for
102611353
cit-r.1
for
102630283
gma-u.5
for
100788332
gma-u.5
for
100306228
vvi-u.5
for
100242603
vvi-u.5
for
100252765
vvi-u.5
for
100260466
ppo-u.5
for
7465901
ppo-u.5
for
7465900
mtr-u.5
for
11425256
mtr-u.5
for
11421732
sly-u.5
for
DEFL1
sly-u.5
for
101263528
sly-u.5
for
101263224
sot-r.1
for
102603276
nta-r.1
for
107775109
nta-r.1
for
107822324
osa-u.5
for
4331501
osa-u.5
for
9271118
zma-u.5
for
103646754
zma-u.5
for
100280590
zma-u.5
for
100281986
tae-r.2
for
123108298
tae-r.2
for
123112873
hvu-r.1
for
123447328
hvu-r.1
for
123447327
bdi-r.1
for
100831511
bdi-r.1
for
100833908


Ortholog ID: 647
Species ath ath ath bra bra ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr sly sly sly sot nta nta osa zma zma zma tae tae hvu hvu bdi
Symbol LCR69 PDF2.5 PDF2.1 LOC103249170 LOC103854018 LOC121216273 LOC107890541 LOC102611353 LOC102630283 LOC100306228 LOC547938 LOC547843 LOC100242603 LOC100252765 LOC100260466 LOC7465901 LOC7465900 LOC11421732 LOC11430877 LOC101263528 LOC101263224 LOC101262930 LOC102603276 LOC107813378 LOC107787010 LOC9271118 LOC103646754 LOC100280590 LOC100281986 LOC123089408 LOC123105798 LOC123447328 LOC123447327 LOC100831511
Function* low-molecular-weight cysteine-rich 69 Scorpion toxin-like knottin superfamily protein Scorpion toxin-like knottin superfamily protein defensin-like protein 2 defensin-like protein 1 defensin-like protein 1 defensin-like protein 1 defensin Ec-AMP-D1 defensin-like protein 1 defensin-like protein 1 defensin-like protein protease inhibitor defensin Ec-AMP-D2 defensin-like protein 1 defensin-like protein 1 defensin-like protein 1 defensin-like protein 1 defensin Ec-AMP-D1 defensin-like protein 1 defensin-like protein 1 defensin-like protein defensin-like protein defensin J1-2 defensin J1-2 defensin-like protein defensin Tk-AMP-D1.1-like defensin Ec-AMP-D1 flower-specific gamma-thionin uncharacterized LOC100281986 defensin Ec-AMP-D2-like defensin Ec-AMP-D2 defensin Ec-AMP-D2-like defensin-like protein 1 defensin Ec-AMP-D1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00380 Tryptophan metabolism 2
ghi04075 Plant hormone signal transduction 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 13
cit03040 Spliceosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
sly00010 Glycolysis / Gluconeogenesis 2
sly00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 8
nta00950 Isoquinoline alkaloid biosynthesis 8
nta00940 Phenylpropanoid biosynthesis 3
nta00941 Flavonoid biosynthesis 3
nta00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta00052 Galactose metabolism 3
nta00561 Glycerolipid metabolism 3
nta00600 Sphingolipid metabolism 3
nta00603 Glycosphingolipid biosynthesis - globo and isoglobo series 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 4
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 2
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00073 Cutin, suberine and wax biosynthesis 2
bdi04146 Peroxisome 2
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814741 836486 814743 103249170 103854018 121216273 107890541 102611353 102630283 100306228 547938 547843 100242603 100252765 100260466 7465901 7465900 11421732 11430877 101263528 101263224 101262930 102603276 107813378 107787010 9271118 103646754 100280590 100281986 123089408 123105798 123447328 123447327 100831511
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