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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   RGF3   root meristem growth factor 
 ath-u.5   RGF3   root meristem growth factor 
 ath-r.7   RGF3   root meristem growth factor 
 ath-m.9   RGF3   root meristem growth factor 
 ath-e.2   RGF3   root meristem growth factor 
 ath-m.4.hor   RGF3   root meristem growth factor 
 ath-m.4.lig   RGF3   root meristem growth factor 
 ath-m.4.str   RGF3   root meristem growth factor 
 ath-m.4.tis   RGF3   root meristem growth factor 

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Top 50 coexpressed genes to RGF3 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RGF3 (ath-m.4.bio coexpression data)

CoexMap"814929"


athRGF3 | Entrez gene ID : 814929      
Species ath ppo hvu nta cre sot bdi sbi bra cit mtr osa ghi vvi gma tae zma sly bna
Paralog 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009786 [list] [network] regulation of asymmetric cell division  (16 genes)  ISS  
GO:0008284 [list] [network] positive regulation of cell population proliferation  (27 genes)  IDA  
GO:2000023 [list] [network] regulation of lateral root development  (31 genes)  ISS  
GO:2000067 [list] [network] regulation of root morphogenesis  (33 genes)  ISS  
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IGI ISS  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IEP  
GO:0030154 [list] [network] cell differentiation  (627 genes)  IDA  
GO CC
GO:0005615 [list] [network] extracellular space  (45 genes)  ISS  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008083 [list] [network] growth factor activity  (9 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001324399.1 [sequence] [blastp]
NP_178486.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001324399.1)
extr 4,  vacu 3,  chlo 2  (predict for NP_178486.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001324399.1)
scret 9  (predict for NP_178486.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
RGF3
ath-u.5
for
RGF3
ath-r.7
for
RGF3
ath-m.9
for
RGF3
ath-e.2
for
RGF3
ath-m.4.hor
for
RGF3
ath-m.4.lig
for
RGF3
ath-m.4.str
for
RGF3
ath-m.4.tis
for
RGF3


Ortholog ID: 13999
Species ath
Symbol RGF3
Function* root meristem growth factor
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern
Entrez Gene ID* 814929
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