ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.bio	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-u.5	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-r.7	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-m.9	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-e.2	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-m.4.hor	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-m.4.lig	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-m.4.str	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-m.4.tis	AT2G15695	peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)
ath-u.5	AT5G44250	peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53)
bra-r.6	103839195	uncharacterized LOC103839195
bra-r.6	103844351	uncharacterized LOC103844351
bra-r.6	103860430	uncharacterized LOC103860430
bna-r.1	111204609	uncharacterized LOC111204609
bna-r.1	111209936	uncharacterized LOC111209936
bna-r.1	106361626	uncharacterized LOC106361626
ghi-r.1	107916570	uncharacterized LOC107916570
ghi-r.1	107894123	uncharacterized LOC107894123
ghi-r.1	107928006	uncharacterized LOC107928006
cit-r.1	102617750	uncharacterized LOC102617750
cit-r.1	102610317	uncharacterized LOC102610317
gma-u.5	100791690	uncharacterized LOC100791690
gma-u.5	100798622	uncharacterized LOC100798622
gma-u.5	100810227	uncharacterized LOC100810227
vvi-u.5	100245307	uncharacterized LOC100245307
vvi-u.5	100243704	uncharacterized LOC100243704
ppo-u.5	7472695	uncharacterized LOC7472695
ppo-u.5	18104914	uncharacterized LOC18104914
ppo-u.5	7490025	uncharacterized LOC7490025
mtr-u.5	11430613	uncharacterized LOC11430613
mtr-u.5	11439584	uncharacterized LOC11439584
sly-u.5	101251130	uncharacterized LOC101251130
sly-u.5	101257658	uncharacterized LOC101257658
sot-r.1	102581518	uncharacterized LOC102581518
sot-r.1	102603536	uncharacterized LOC102603536
nta-r.1	107761413	uncharacterized LOC107761413
nta-r.1	107808339	uncharacterized LOC107808339
nta-r.1	107798817	uncharacterized LOC107798817
osa-u.5	4350916	uncharacterized LOC4350916
osa-u.5	4340472	uncharacterized LOC4340472
zma-u.5	103637883	uncharacterized LOC103637883
zma-u.5	100191550	uncharacterized LOC100191550
zma-u.5	100277688	uncharacterized LOC100277688
tae-r.2	123111490	uncharacterized LOC123111490
tae-r.2	123103301	uncharacterized LOC123103301
tae-r.2	123149673	uncharacterized LOC123149673
hvu-r.1	123443481	uncharacterized LOC123443481
hvu-r.1	123409091	uncharacterized LOC123409091
sbi-r.1	8070766	uncharacterized LOC8070766
sbi-r.1	8066734	uncharacterized LOC8066734
bdi-r.1	100834545	uncharacterized LOC100834545
bdi-r.1	100824972	uncharacterized LOC100824972
cre-r.1	CHLRE_17g731450v5	uncharacterized protein

Top 50 coexpressed genes to AT2G15695 (ath-m.4.bio coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT2G15695 (ath-m.4.bio coexpression data)

CoexMap"816063"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_565378.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 4, pero 1

(predict for NP_565378.1)

Subcellular
localization
TargetP

other 9

(predict for NP_565378.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.bio for AT2G15695	ath-u.5 for AT2G15695	ath-r.7 for AT2G15695	ath-m.9 for AT2G15695	ath-e.2 for AT2G15695	ath-m.4.hor for AT2G15695	ath-m.4.lig for AT2G15695	ath-m.4.str for AT2G15695	ath-m.4.tis for AT2G15695	ath-u.5 for AT5G44250	bra-r.6 for 103839195	bra-r.6 for 103844351	bra-r.6 for 103860430	bna-r.1 for 111204609	bna-r.1 for 111209936	bna-r.1 for 106361626	ghi-r.1 for 107916570	ghi-r.1 for 107894123	ghi-r.1 for 107928006	cit-r.1 for 102617750	cit-r.1 for 102610317	gma-u.5 for 100791690	gma-u.5 for 100798622	gma-u.5 for 100810227	vvi-u.5 for 100245307	vvi-u.5 for 100243704	ppo-u.5 for 7472695	ppo-u.5 for 18104914	ppo-u.5 for 7490025	mtr-u.5 for 11430613	mtr-u.5 for 11439584	sly-u.5 for 101251130	sly-u.5 for 101257658	sot-r.1 for 102581518	sot-r.1 for 102603536	nta-r.1 for 107761413	nta-r.1 for 107808339	nta-r.1 for 107798817	osa-u.5 for 4350916	osa-u.5 for 4340472	zma-u.5 for 103637883	zma-u.5 for 100191550	zma-u.5 for 100277688	tae-r.2 for 123111490	tae-r.2 for 123103301	tae-r.2 for 123149673	hvu-r.1 for 123443481	hvu-r.1 for 123409091	sbi-r.1 for 8070766	sbi-r.1 for 8066734	bdi-r.1 for 100834545	bdi-r.1 for 100824972	cre-r.1 for CHLRE_17g731450v5

Ortholog

Ortholog ID: 2445

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53)

peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53)

uncharacterized LOC103839195

uncharacterized LOC103844351

uncharacterized LOC103860430

uncharacterized LOC111204609

uncharacterized LOC106361626

uncharacterized LOC106445630

uncharacterized LOC107916570

uncharacterized LOC107908913

uncharacterized LOC107905555

uncharacterized LOC102617750

uncharacterized LOC102610317

uncharacterized LOC100791690

uncharacterized LOC100798622

uncharacterized LOC100817749

uncharacterized LOC100245307

uncharacterized LOC100243704

uncharacterized LOC7472695

uncharacterized LOC18104914

uncharacterized LOC18097797

uncharacterized LOC11430613

uncharacterized LOC11439584

uncharacterized LOC101251130

uncharacterized LOC101257658

uncharacterized LOC102581518

uncharacterized LOC102603536

uncharacterized LOC107761413

uncharacterized LOC107808339

uncharacterized LOC107798817

uncharacterized LOC4350916

uncharacterized LOC4340472

uncharacterized LOC103637883

uncharacterized LOC100191550

uncharacterized LOC100277688

uncharacterized LOC123111490

uncharacterized LOC123165245

uncharacterized LOC123120704

uncharacterized LOC123443481

uncharacterized LOC123409091

uncharacterized LOC8070766

uncharacterized LOC8066734

uncharacterized LOC100834545

uncharacterized LOC100824972

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00350	Tyrosine metabolism	3
ath00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ath00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	4
ath04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	2
ghi00410	beta-Alanine metabolism	2
ghi00770	Pantothenate and CoA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00280	Valine, leucine and isoleucine degradation	2
ghi00410	beta-Alanine metabolism	2
ghi00562	Inositol phosphate metabolism	2
ghi00640	Propanoate metabolism	2
ghi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	2
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2
sot01240	Biosynthesis of cofactors	2
sot00562	Inositol phosphate metabolism	2
sot04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00280	Valine, leucine and isoleucine degradation	4
nta00260	Glycine, serine and threonine metabolism	3
nta00310	Lysine degradation	3
nta00860	Porphyrin metabolism	2
nta00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00260	Glycine, serine and threonine metabolism	3
nta00280	Valine, leucine and isoleucine degradation	3
nta00860	Porphyrin metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	4
nta04070	Phosphatidylinositol signaling system	4
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2
zma00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	5
tae04142	Lysosome	3
tae00511	Other glycan degradation	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	5
tae03018	RNA degradation	3
tae04142	Lysosome	3
tae00511	Other glycan degradation	2
tae04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04146	Peroxisome	5
cre00071	Fatty acid degradation	4
cre01212	Fatty acid metabolism	4
cre01200	Carbon metabolism	4
cre00592	alpha-Linolenic acid metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

816063

834448

103839195

103844351

103860430

111204609

106361626

106445630

107916570

107908913

107905555

102617750

102610317

100791690

100798622

100817749

100245307

100243704

7472695

18104914

18097797

11430613

11439584

101251130

101257658

102581518

102603536

107761413

107808339

107798817

4350916

4340472

103637883

100191550

100277688

123111490

123165245

123120704

123443481

123409091

8070766

8066734

100834545

100824972

66057082

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Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	10	3	3	3	2	3	2	3	2	2	2	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT2G15695 (ath-m.4.bio coexpression data)

Top 50 enrichment test to AT2G15695 (ath-m.4.bio coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**