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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   LBD15   LOB domain-containing protein 15 
 ath-u.5   LBD15   LOB domain-containing protein 15 
 ath-r.7   LBD15   LOB domain-containing protein 15 
 ath-m.9   LBD15   LOB domain-containing protein 15 
 ath-e.2   LBD15   LOB domain-containing protein 15 
 ath-m.4.hor   LBD15   LOB domain-containing protein 15 
 ath-m.4.lig   LBD15   LOB domain-containing protein 15 
 ath-m.4.str   LBD15   LOB domain-containing protein 15 
 ath-m.4.tis   LBD15   LOB domain-containing protein 15 
 ghi-r.1   121229707   LOB domain-containing protein 15 
 ghi-r.1   107927059   LOB domain-containing protein 15 
 ghi-r.1   107935063   LOB domain-containing protein 15 
 cit-r.1   102630293   LOB domain-containing protein 15 
 cit-r.1   102625477   LOB domain-containing protein 15 
 gma-u.5   LBD7.2   LBD domain-containing transcription factor 
 gma-u.5   100813489   LOB domain-containing protein 13 
 vvi-u.5   100251929   LOB domain-containing protein 15 
 vvi-u.5   100262112   LOB domain-containing protein 15 
 ppo-u.5   18104206   LOB domain-containing protein 15 
 ppo-u.5   7465172   LOB domain-containing protein 15 
 mtr-u.5   11430462   LOB domain-containing protein 15 
 mtr-u.5   11433115   LOB domain-containing protein 13 
 mtr-u.5   11418509   LOB domain-containing protein 15 
 sly-u.5   101261527   LOB domain-containing protein 15 
 sot-r.1   102601503   LOB domain-containing protein 13 
 sot-r.1   102578854   LOB domain-containing protein 15-like 
 sot-r.1   102578598   LOB domain-containing protein 15 
 nta-r.1   107814010   LOB domain-containing protein 15-like 
 nta-r.1   107805527   LOB domain-containing protein 15-like 
 nta-r.1   107786415   LOB domain-containing protein 15 
 osa-u.5   4327581   LOB domain-containing protein 15 
 hvu-r.1   123426464   LOB domain-containing protein 15-like 
 hvu-r.1   123440588   LOB domain-containing protein 15-like 
 bdi-r.1   100844657   LOB domain-containing protein 15 

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Top 50 coexpressed genes to LBD15 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LBD15 (ath-m.4.bio coexpression data)

CoexMap"818641"


athLBD15 | Entrez gene ID : 818641      
Species ath ghi cit gma vvi ppo mtr sly sot nta osa hvu bdi tae bna zma cre sbi bra
Paralog 9 3 2 2 2 2 3 1 3 3 1 2 1 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1905177 [list] [network] tracheary element differentiation  (17 genes)  IMP  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001324899.1 [sequence] [blastp]
NP_565933.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001324899.1)
nucl 5,  chlo 4,  cyto 1,  mito 1  (predict for NP_565933.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_001324899.1)
other 8  (predict for NP_565933.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
LBD15
ath-u.5
for
LBD15
ath-r.7
for
LBD15
ath-m.9
for
LBD15
ath-e.2
for
LBD15
ath-m.4.hor
for
LBD15
ath-m.4.lig
for
LBD15
ath-m.4.str
for
LBD15
ath-m.4.tis
for
LBD15
ghi-r.1
for
121229707
ghi-r.1
for
107927059
ghi-r.1
for
107935063
cit-r.1
for
102630293
cit-r.1
for
102625477
gma-u.5
for
LBD7.2
gma-u.5
for
100813489
vvi-u.5
for
100251929
vvi-u.5
for
100262112
ppo-u.5
for
18104206
ppo-u.5
for
7465172
mtr-u.5
for
11430462
mtr-u.5
for
11433115
mtr-u.5
for
11418509
sly-u.5
for
101261527
sot-r.1
for
102601503
sot-r.1
for
102578854
sot-r.1
for
102578598
nta-r.1
for
107814010
nta-r.1
for
107805527
nta-r.1
for
107786415
osa-u.5
for
4327581
hvu-r.1
for
123426464
hvu-r.1
for
123440588
bdi-r.1
for
100844657


Ortholog ID: 2626
Species ath ghi cit cit gma vvi vvi ppo ppo mtr mtr mtr sly sot sot sot nta nta nta osa hvu hvu bdi
Symbol LBD15 LOC107927059 LOC102630293 LOC102625477 LBD7.2 LOC100251929 LOC100262112 LOC18104206 LOC7465172 LOC11430462 LOC11433115 LOC11418509 LOC101261527 LOC102601503 LOC102578854 LOC102578598 LOC107814010 LOC107805527 LOC107762548 LOC4327581 LOC123426464 LOC123440588 LOC100844657
Function* LOB domain-containing protein 15 LOB domain-containing protein 15 LOB domain-containing protein 15 LOB domain-containing protein 15 LBD domain-containing transcription factor LOB domain-containing protein 15 LOB domain-containing protein 15 LOB domain-containing protein 15 LOB domain-containing protein 15 LOB domain-containing protein 15 LOB domain-containing protein 13 LOB domain-containing protein 15 LOB domain-containing protein 15 LOB domain-containing protein 13 LOB domain-containing protein 15-like LOB domain-containing protein 15 LOB domain-containing protein 15-like LOB domain-containing protein 15-like LOB domain-containing protein 15-like LOB domain-containing protein 15 LOB domain-containing protein 15-like LOB domain-containing protein 15-like LOB domain-containing protein 15
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi04981 Folate transport and metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04130 SNARE interactions in vesicular transport 2
cit00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 7
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 5
nta00040 Pentose and glucuronate interconversions 3
nta00740 Riboflavin metabolism 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 3
hvu04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818641 107927059 102630293 102625477 100778248 100251929 100262112 18104206 7465172 11430462 11433115 11418509 101261527 102601503 102578854 102578598 107814010 107805527 107762548 4327581 123426464 123440588 100844657
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