ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.bio	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-r.7	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-m.9	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-e.2	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-m.4.hor	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-m.4.lig	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-m.4.str	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-m.4.tis	AT3G09690	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT5G02970	alpha/beta-Hydrolases superfamily protein
bra-r.6	103848020	uncharacterized LOC103848020
bra-r.6	103847413	uncharacterized LOC103847413
bna-r.1	106410307	uncharacterized LOC106410307
bna-r.1	106427938	uncharacterized LOC106427938
bna-r.1	111213200	uncharacterized LOC111213200
ghi-r.1	107889618	uncharacterized LOC107889618
ghi-r.1	107891111	uncharacterized LOC107891111
ghi-r.1	107953206	uncharacterized LOC107953206
cit-r.1	102620084	uncharacterized LOC102620084
cit-r.1	102622707	uncharacterized LOC102622707
gma-u.5	100799698	uncharacterized LOC100799698
gma-u.5	100790561	uncharacterized LOC100790561
gma-u.5	100785642	uncharacterized LOC100785642
vvi-u.5	100263767	uncharacterized LOC100263767
vvi-u.5	100248201	uncharacterized LOC100248201
ppo-u.5	7465302	uncharacterized LOC7465302
ppo-u.5	7479503	uncharacterized LOC7479503
mtr-u.5	11425772	uncharacterized LOC11425772
mtr-u.5	11426425	uncharacterized LOC11426425
sly-u.5	101255329	uncharacterized LOC101255329
sly-u.5	101248170	uncharacterized LOC101248170
sot-r.1	102584571	uncharacterized LOC102584571
sot-r.1	102604239	uncharacterized LOC102604239
nta-r.1	107802586	uncharacterized LOC107802586
nta-r.1	107790869	uncharacterized LOC107790869
nta-r.1	107783111	uncharacterized LOC107783111
osa-u.5	4332488	uncharacterized LOC4332488
osa-u.5	4352417	uncharacterized LOC4352417
zma-u.5	100191424	alpha/beta-Hydrolases superfamily protein
zma-u.5	100274584	alpha/beta-Hydrolases superfamily protein
tae-r.2	123092487	uncharacterized LOC123092487
tae-r.2	123097802	uncharacterized LOC123097802
tae-r.2	123085554	uncharacterized LOC123085554
hvu-r.1	123448933	uncharacterized LOC123448933
sbi-r.1	8081441	uncharacterized LOC8081441
bdi-r.1	100834956	uncharacterized LOC100834956

Top 50 coexpressed genes to AT3G09690 (ath-m.4.bio coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT3G09690 (ath-m.4.bio coexpression data)

CoexMap"820126"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_001030665.1 [sequence] [blastp]
NP_187580.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, chlo 3, cysk_nucl 2, vacu 1, mito 1, plas 1, E.R. 1, E.R._plas 1, mito_plas 1	(predict for NP_001030665.1)
nucl 3, chlo 3, cysk_nucl 2, vacu 1, mito 1, plas 1, E.R. 1, E.R._plas 1, mito_plas 1	(predict for NP_187580.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001030665.1)
other 8	(predict for NP_187580.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.bio for AT3G09690	ath-u.5 for AT3G09690	ath-r.7 for AT3G09690	ath-m.9 for AT3G09690	ath-e.2 for AT3G09690	ath-m.4.hor for AT3G09690	ath-m.4.lig for AT3G09690	ath-m.4.str for AT3G09690	ath-m.4.tis for AT3G09690	ath-u.5 for AT5G02970	bra-r.6 for 103848020	bra-r.6 for 103847413	bna-r.1 for 106410307	bna-r.1 for 106427938	bna-r.1 for 111213200	ghi-r.1 for 107889618	ghi-r.1 for 107891111	ghi-r.1 for 107953206	cit-r.1 for 102620084	cit-r.1 for 102622707	gma-u.5 for 100799698	gma-u.5 for 100790561	gma-u.5 for 100785642	vvi-u.5 for 100263767	vvi-u.5 for 100248201	ppo-u.5 for 7465302	ppo-u.5 for 7479503	mtr-u.5 for 11425772	mtr-u.5 for 11426425	sly-u.5 for 101255329	sly-u.5 for 101248170	sot-r.1 for 102584571	sot-r.1 for 102604239	nta-r.1 for 107802586	nta-r.1 for 107790869	nta-r.1 for 107783111	osa-u.5 for 4332488	osa-u.5 for 4352417	zma-u.5 for 100191424	zma-u.5 for 100274584	tae-r.2 for 123092487	tae-r.2 for 123097802	tae-r.2 for 123085554	hvu-r.1 for 123448933	sbi-r.1 for 8081441	bdi-r.1 for 100834956

Ortholog

Ortholog ID: 4541

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

alpha/beta-Hydrolases superfamily protein

uncharacterized LOC103848020

uncharacterized LOC103847413

uncharacterized LOC106410307

uncharacterized LOC106427938

uncharacterized LOC106372614

uncharacterized LOC107891111

uncharacterized LOC107953206

uncharacterized LOC107954244

uncharacterized LOC102620084

uncharacterized LOC102622707

uncharacterized LOC100799698

uncharacterized LOC100790561

uncharacterized LOC100781919

uncharacterized LOC100263767

uncharacterized LOC100248201

uncharacterized LOC7465302

uncharacterized LOC7479503

uncharacterized LOC11425772

uncharacterized LOC11426425

uncharacterized LOC101255329

uncharacterized LOC101248170

uncharacterized LOC102584571

uncharacterized LOC102604239

uncharacterized LOC107790869

uncharacterized LOC107783111

uncharacterized LOC107798643

uncharacterized LOC4332488

uncharacterized LOC4352417

alpha/beta-Hydrolases superfamily protein

uncharacterized LOC123092487

uncharacterized LOC123097802

uncharacterized LOC123085554

uncharacterized LOC123448933

uncharacterized LOC8081441

uncharacterized LOC100834956

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	4
ath00510	N-Glycan biosynthesis	3
ath00513	Various types of N-glycan biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2
ath04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00010	Glycolysis / Gluconeogenesis	2
bra01200	Carbon metabolism	2
bra00350	Tyrosine metabolism	2
bra00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	4
ghi00040	Pentose and glucuronate interconversions	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01240	Biosynthesis of cofactors	4
ghi00040	Pentose and glucuronate interconversions	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	4
cit01230	Biosynthesis of amino acids	4
cit01210	2-Oxocarboxylic acid metabolism	3
cit01232	Nucleotide metabolism	2
cit00020	Citrate cycle (TCA cycle)	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00541	Biosynthesis of various nucleotide sugars	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00010	Glycolysis / Gluconeogenesis	2
sot00030	Pentose phosphate pathway	2
sot00051	Fructose and mannose metabolism	2
sot00052	Galactose metabolism	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00760	Nicotinate and nicotinamide metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	5
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04712	Circadian rhythm - plant	3
tae04144	Endocytosis	2
tae04517	IgSF CAM signaling	2
tae05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04130	SNARE interactions in vesicular transport	3
bdi01212	Fatty acid metabolism	3
bdi00061	Fatty acid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

820126

831719

103848020

103847413

106410307

106427938

106372614

107891111

107953206

107954244

102620084

102622707

100799698

100790561

100781919

100263767

100248201

7465302

7479503

11425772

11426425

101255329

101248170

102584571

102604239

107790869

107783111

107798643

4332488

4352417

100191424

100274584

123092487

123097802

123085554

123448933

8081441

100834956

The preparation time of this page was 0.1 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	10	2	3	3	2	3	2	2	2	2	2	3	2	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT3G09690 (ath-m.4.bio coexpression data)

Top 50 enrichment test to AT3G09690 (ath-m.4.bio coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**