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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT3G27520   cryptic loci regulator 
 ath-u.5   AT3G27520   cryptic loci regulator 
 ath-r.7   AT3G27520   cryptic loci regulator 
 ath-m.9   AT3G27520   cryptic loci regulator 
 ath-e.2   AT3G27520   cryptic loci regulator 
 ath-m.4.hor   AT3G27520   cryptic loci regulator 
 ath-m.4.lig   AT3G27520   cryptic loci regulator 
 ath-m.4.str   AT3G27520   cryptic loci regulator 
 ath-m.4.tis   AT3G27520   cryptic loci regulator 
 bra-r.6   103875210   uncharacterized LOC103875210 
 bra-r.6   103836997   uncharacterized LOC103836997 
 bna-r.1   106428840   uncharacterized LOC106428840 
 bna-r.1   106391702   uncharacterized LOC106391702 
 bna-r.1   106352400   uncharacterized LOC106352400 
 ghi-r.1   107889121   uncharacterized LOC107889121 
 ghi-r.1   107891706   uncharacterized LOC107891706 
 cit-r.1   102612237   uncharacterized LOC102612237 
 gma-u.5   102664771   uncharacterized LOC102664771 
 gma-u.5   100794459   uncharacterized LOC100794459 
 vvi-u.5   100242256   uncharacterized LOC100242256 
 ppo-u.5   7467649   uncharacterized LOC7467649 
 mtr-u.5   25495111   uncharacterized LOC25495111 
 sly-u.5   101260287   uncharacterized LOC101260287 
 sot-r.1   102583449   uncharacterized LOC102583449 
 nta-r.1   107794711   uncharacterized LOC107794711 
 nta-r.1   107773278   uncharacterized LOC107773278 
 osa-u.5   4329856   uncharacterized LOC4329856 
 zma-u.5   100274314   uncharacterized LOC100274314 
 zma-u.5   100275979   uncharacterized LOC100275979 
 sbi-r.1   8070604   uncharacterized LOC8070604 
 bdi-r.1   100825014   uncharacterized LOC100825014 

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Top 50 coexpressed genes to AT3G27520 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G27520 (ath-m.4.bio coexpression data)

CoexMap"822374"


athAT3G27520 | Entrez gene ID : 822374      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma sbi bdi hvu tae cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 2 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_566819.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for NP_566819.1)
Subcellular
localization
TargetP
other 9  (predict for NP_566819.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT3G27520
ath-u.5
for
AT3G27520
ath-r.7
for
AT3G27520
ath-m.9
for
AT3G27520
ath-e.2
for
AT3G27520
ath-m.4.hor
for
AT3G27520
ath-m.4.lig
for
AT3G27520
ath-m.4.str
for
AT3G27520
ath-m.4.tis
for
AT3G27520
bra-r.6
for
103875210
bra-r.6
for
103836997
bna-r.1
for
106428840
bna-r.1
for
106391702
bna-r.1
for
106352400
ghi-r.1
for
107889121
ghi-r.1
for
107891706
cit-r.1
for
102612237
gma-u.5
for
102664771
gma-u.5
for
100794459
vvi-u.5
for
100242256
ppo-u.5
for
7467649
mtr-u.5
for
25495111
sly-u.5
for
101260287
sot-r.1
for
102583449
nta-r.1
for
107794711
nta-r.1
for
107773278
osa-u.5
for
4329856
zma-u.5
for
100274314
zma-u.5
for
100275979
sbi-r.1
for
8070604
bdi-r.1
for
100825014


Ortholog ID: 8032
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma sbi bdi
Symbol AT3G27520 LOC103875210 LOC103836997 LOC106428840 LOC106391702 LOC106352400 LOC107889121 LOC107891706 LOC102612237 LOC102664771 LOC100794459 LOC100242256 LOC7467649 LOC25495111 LOC101260287 LOC102583449 LOC107794711 LOC107773278 LOC4329856 LOC100274314 LOC100275979 LOC8070604 LOC100825014
Function* cryptic loci regulator uncharacterized LOC103875210 uncharacterized LOC103836997 uncharacterized LOC106428840 uncharacterized LOC106391702 uncharacterized LOC106352400 uncharacterized LOC107889121 uncharacterized LOC107891706 uncharacterized LOC102612237 uncharacterized LOC102664771 uncharacterized LOC100794459 uncharacterized LOC100242256 uncharacterized LOC7467649 uncharacterized LOC25495111 uncharacterized LOC101260287 uncharacterized LOC102583449 uncharacterized LOC107794711 uncharacterized LOC107773278 uncharacterized LOC4329856 uncharacterized LOC100274314 uncharacterized LOC100275979 uncharacterized LOC8070604 uncharacterized LOC100825014
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04130 SNARE interactions in vesicular transport 5
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 7
ghi03015 mRNA surveillance pathway 7
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 7
ghi03015 mRNA surveillance pathway 7
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma03440 Homologous recombination 3
gma03460 Fanconi anemia pathway 3
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 4
vvi00190 Oxidative phosphorylation 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta03460 Fanconi anemia pathway 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03430 Mismatch repair 3
zma03030 DNA replication 2
zma03410 Base excision repair 2
zma03420 Nucleotide excision repair 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
bdi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822374 103875210 103836997 106428840 106391702 106352400 107889121 107891706 102612237 102664771 100794459 100242256 7467649 25495111 101260287 102583449 107794711 107773278 4329856 100274314 100275979 8070604 100825014
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