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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT3G27930   beta-galactosidase 
 ath-u.5   AT3G27930   beta-galactosidase 
 ath-r.7   AT3G27930   beta-galactosidase 
 ath-m.9   AT3G27930   beta-galactosidase 
 ath-e.2   AT3G27930   beta-galactosidase 
 ath-m.4.hor   AT3G27930   beta-galactosidase 
 ath-m.4.lig   AT3G27930   beta-galactosidase 
 ath-m.4.str   AT3G27930   beta-galactosidase 
 ath-m.4.tis   AT3G27930   beta-galactosidase 
 ghi-r.1   107942325   uncharacterized LOC107942325 
 ghi-r.1   107926471   uncharacterized LOC107926471 
 cit-r.1   102617442   uncharacterized LOC102617442 
 gma-u.5   100784371   uncharacterized LOC100784371 
 vvi-u.5   100243971   uncharacterized LOC100243971 
 ppo-u.5   7487857   uncharacterized LOC7487857 
 mtr-u.5   11433955   uncharacterized LOC11433955 
 sly-u.5   101258818   uncharacterized LOC101258818 
 sot-r.1   102589054   uncharacterized LOC102589054 
 nta-r.1   107784250   uncharacterized LOC107784250 
 nta-r.1   107767924   uncharacterized LOC107767924 
 nta-r.1   142164381   uncharacterized LOC142164381 
 osa-u.5   4339703   uncharacterized LOC4339703 
 zma-u.5   100382356   uncharacterized LOC100382356 
 tae-r.2   123147815   uncharacterized LOC123147815 
 sbi-r.1   8083800   uncharacterized LOC8083800 
 bdi-r.1   100829590   uncharacterized LOC100829590 
 cre-r.1   CHLRE_08g358552v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G27930 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G27930 (ath-m.4.bio coexpression data)

CoexMap"822417"


athAT3G27930 | Entrez gene ID : 822417      
Species ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae sbi bdi cre bna hvu bra
Paralog 9 2 1 1 1 1 1 1 1 3 1 1 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1900057 [list] [network] positive regulation of leaf senescence  (21 genes)  IMP  
GO CC
GO:0005741 [list] [network] mitochondrial outer membrane  (37 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008308 [list] [network] voltage-gated monoatomic anion channel activity  (20 genes)  IGI  
Protein NP_001189992.1 [sequence] [blastp]
NP_001327075.1 [sequence] [blastp]
NP_566828.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001189992.1)
chlo 6,  cyto 1,  extr 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001327075.1)
chlo 6,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_566828.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001189992.1)
other 7  (predict for NP_001327075.1)
other 7  (predict for NP_566828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT3G27930
ath-u.5
for
AT3G27930
ath-r.7
for
AT3G27930
ath-m.9
for
AT3G27930
ath-e.2
for
AT3G27930
ath-m.4.hor
for
AT3G27930
ath-m.4.lig
for
AT3G27930
ath-m.4.str
for
AT3G27930
ath-m.4.tis
for
AT3G27930
ghi-r.1
for
107942325
ghi-r.1
for
107926471
cit-r.1
for
102617442
gma-u.5
for
100784371
vvi-u.5
for
100243971
ppo-u.5
for
7487857
mtr-u.5
for
11433955
sly-u.5
for
101258818
sot-r.1
for
102589054
nta-r.1
for
107784250
nta-r.1
for
107767924
nta-r.1
for
142164381
osa-u.5
for
4339703
zma-u.5
for
100382356
tae-r.2
for
123147815
sbi-r.1
for
8083800
bdi-r.1
for
100829590
cre-r.1
for
CHLRE_08g358552v5


Ortholog ID: 3112
Species ath ghi ghi cit gma vvi ppo mtr sly sot nta nta nta osa zma tae tae hvu sbi bdi cre
Symbol AT3G27930 LOC107942325 LOC107926471 LOC102617442 LOC100784371 LOC100243971 LOC7487857 LOC11433955 LOC101258818 LOC102589054 LOC107784250 LOC107767924 LOC142164381 LOC4339703 LOC100382356 LOC123068419 LOC123068418 LOC123451531 LOC8083800 LOC100829590 CHLRE_08g358552v5
Function* beta-galactosidase uncharacterized LOC107942325 uncharacterized LOC107926471 uncharacterized LOC102617442 uncharacterized LOC100784371 uncharacterized LOC100243971 uncharacterized LOC7487857 uncharacterized LOC11433955 uncharacterized LOC101258818 uncharacterized LOC102589054 uncharacterized LOC107784250 uncharacterized LOC107767924 uncharacterized LOC142164381 uncharacterized LOC4339703 uncharacterized LOC100382356 uncharacterized LOC123068419 uncharacterized LOC123068418 uncharacterized LOC123451531 uncharacterized LOC8083800 uncharacterized LOC100829590 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03250 Viral life cycle - HIV-1 3
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 6
sbi03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822417 107942325 107926471 102617442 100784371 100243971 7487857 11433955 101258818 102589054 107784250 107767924 142164381 4339703 100382356 123068419 123068418 123451531 8083800 100829590 66054273
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