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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT3G29280   uncharacterized protein 
 ath-u.5   AT3G29280   uncharacterized protein 
 ath-r.7   AT3G29280   uncharacterized protein 
 ath-m.9   AT3G29280   uncharacterized protein 
 ath-e.2   AT3G29280   uncharacterized protein 
 ath-m.4.hor   AT3G29280   uncharacterized protein 
 ath-m.4.lig   AT3G29280   uncharacterized protein 
 ath-m.4.str   AT3G29280   uncharacterized protein 
 ath-m.4.tis   AT3G29280   uncharacterized protein 
 bra-r.6   103875089   uncharacterized LOC103875089 
 bra-r.6   103854142   uncharacterized LOC103854142 
 ghi-r.1   121221095   uncharacterized LOC121221095 
 ghi-r.1   107888557   uncharacterized LOC107888557 
 cit-r.1   102617977   uncharacterized LOC102617977 
 gma-u.5   100306056   uncharacterized LOC100306056 
 gma-u.5   100795132   uncharacterized LOC100795132 
 vvi-u.5   100243877   uncharacterized LOC100243877 
 ppo-u.5   112324751   uncharacterized LOC112324751 
 sot-r.1   102585489   uncharacterized LOC102585489 
 nta-r.1   107809783   uncharacterized LOC107809783 
 nta-r.1   107785219   uncharacterized LOC107785219 
 osa-u.5   4332299   uncharacterized LOC4332299 
 zma-u.5   100193947   uncharacterized LOC100193947 
 tae-r.2   123098012   uncharacterized LOC123098012 
 tae-r.2   123092713   uncharacterized LOC123092713 
 tae-r.2   123085327   uncharacterized LOC123085327 
 hvu-r.1   123449112   uncharacterized LOC123449112 
 hvu-r.1   123449109   uncharacterized LOC123449109 
 sbi-r.1   110431736   uncharacterized LOC110431736 
 bdi-r.1   100829129   uncharacterized LOC100829129 

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Top 50 coexpressed genes to AT3G29280 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G29280 (ath-m.4.bio coexpression data)

CoexMap"822585"


athAT3G29280 | Entrez gene ID : 822585      
Species ath bra ghi cit gma vvi ppo sot nta osa zma tae hvu sbi bdi bna mtr sly cre
Paralog 9 2 2 1 2 1 1 1 2 1 1 3 2 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001326832.1 [sequence] [blastp]
NP_189574.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001326832.1)
cyto 9,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_189574.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001326832.1)
other 9  (predict for NP_189574.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT3G29280
ath-u.5
for
AT3G29280
ath-r.7
for
AT3G29280
ath-m.9
for
AT3G29280
ath-e.2
for
AT3G29280
ath-m.4.hor
for
AT3G29280
ath-m.4.lig
for
AT3G29280
ath-m.4.str
for
AT3G29280
ath-m.4.tis
for
AT3G29280
bra-r.6
for
103875089
bra-r.6
for
103854142
ghi-r.1
for
121221095
ghi-r.1
for
107888557
cit-r.1
for
102617977
gma-u.5
for
100306056
gma-u.5
for
100795132
vvi-u.5
for
100243877
ppo-u.5
for
112324751
sot-r.1
for
102585489
nta-r.1
for
107809783
nta-r.1
for
107785219
osa-u.5
for
4332299
zma-u.5
for
100193947
tae-r.2
for
123098012
tae-r.2
for
123092713
tae-r.2
for
123085327
hvu-r.1
for
123449112
hvu-r.1
for
123449109
sbi-r.1
for
110431736
bdi-r.1
for
100829129


Ortholog ID: 8035
Species ath bra bra ghi ghi cit gma gma vvi ppo sot nta nta osa zma tae tae tae hvu hvu sbi bdi
Symbol AT3G29280 LOC103875089 LOC103854142 LOC121221095 LOC107888557 LOC102617977 LOC100306056 LOC100795132 LOC100243877 LOC112324751 LOC102585489 LOC107809783 LOC107785219 LOC4332299 LOC100193947 LOC123098012 LOC123092713 LOC123085327 LOC123449112 LOC123449109 LOC110431736 LOC100829129
Function* uncharacterized protein uncharacterized LOC103875089 uncharacterized LOC103854142 uncharacterized LOC121221095 uncharacterized LOC107888557 uncharacterized LOC102617977 uncharacterized LOC100306056 uncharacterized LOC100795132 uncharacterized LOC100243877 uncharacterized LOC112324751 uncharacterized LOC102585489 uncharacterized LOC107809783 uncharacterized LOC107785219 uncharacterized LOC4332299 uncharacterized LOC100193947 uncharacterized LOC123098012 uncharacterized LOC123092713 uncharacterized LOC123085327 uncharacterized LOC123449112 uncharacterized LOC123449109 uncharacterized LOC110431736 uncharacterized LOC100829129
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 5
ghi00790 Folate biosynthesis 3
ghi04120 Ubiquitin mediated proteolysis 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma03020 RNA polymerase 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00909 Sesquiterpenoid and triterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03018 RNA degradation 3
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 3
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822585 103875089 103854142 121221095 107888557 102617977 100306056 100795132 100243877 112324751 102585489 107809783 107785219 4332299 100193947 123098012 123092713 123085327 123449112 123449109 110431736 100829129
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