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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   CHL   chloroplastic lipocalin 
 ath-u.5   CHL   chloroplastic lipocalin 
 ath-r.7   CHL   chloroplastic lipocalin 
 ath-m.9   CHL   chloroplastic lipocalin 
 ath-e.2   CHL   chloroplastic lipocalin 
 ath-m.4.hor   CHL   chloroplastic lipocalin 
 ath-m.4.lig   CHL   chloroplastic lipocalin 
 ath-m.4.str   CHL   chloroplastic lipocalin 
 ath-m.4.tis   CHL   chloroplastic lipocalin 
 bra-r.6   103873561   chloroplastic lipocalin 
 bna-r.1   106425541   chloroplastic lipocalin 
 bna-r.1   111210043   chloroplastic lipocalin-like 
 ghi-r.1   107918073   chloroplastic lipocalin 
 ghi-r.1   107938645   chloroplastic lipocalin 
 cit-r.1   102615887   hypothetical protein 
 gma-u.5   100814557   chloroplastic lipocalin 
 gma-u.5   CHL   chloroplastic lipocalin 
 vvi-u.5   100250424   chloroplastic lipocalin 
 ppo-u.5   18095938   chloroplastic lipocalin 
 mtr-u.5   11429972   chloroplastic lipocalin 
 sly-u.5   101260607   chloroplastic lipocalin 
 nta-r.1   107803353   chloroplastic lipocalin-like 
 nta-r.1   107763432   chloroplastic lipocalin 
 osa-u.5   4337069   chloroplastic lipocalin 
 zma-u.5   100283155   chloroplastic lipocalin 
 tae-r.2   123190508   chloroplastic lipocalin 
 tae-r.2   123054660   chloroplastic lipocalin 
 tae-r.2   123046808   chloroplastic lipocalin 
 hvu-r.1   123427911   chloroplastic lipocalin 
 sbi-r.1   110436533   chloroplastic lipocalin 
 bdi-r.1   100828257   chloroplastic lipocalin 

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Top 50 coexpressed genes to CHL (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHL (ath-m.4.bio coexpression data)

CoexMap"823942"


athCHL | Entrez gene ID : 823942      
Species ath bra bna ghi cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi sot cre
Paralog 9 1 2 2 1 2 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0046322 [list] [network] negative regulation of fatty acid oxidation  (2 genes)  IMP  
GO:1901562 [list] [network] response to paraquat  (5 genes)  IEP  
GO:0010117 [list] [network] photoprotection  (14 genes)  IDA  
GO:0010431 [list] [network] seed maturation  (68 genes)  IMP  
GO:0009644 [list] [network] response to high light intensity  (71 genes)  IEP IMP  
GO:0009408 [list] [network] response to heat  (271 genes)  IMP  
GO:0006979 [list] [network] response to oxidative stress  (384 genes)  IMP  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO CC
GO:0031977 [list] [network] thylakoid lumen  (69 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO MF
GO:0036094 [list] [network] small molecule binding  (1809 genes)  IEA  
Protein NP_190370.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_190370.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_190370.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
CHL
ath-u.5
for
CHL
ath-r.7
for
CHL
ath-m.9
for
CHL
ath-e.2
for
CHL
ath-m.4.hor
for
CHL
ath-m.4.lig
for
CHL
ath-m.4.str
for
CHL
ath-m.4.tis
for
CHL
bra-r.6
for
103873561
bna-r.1
for
106425541
bna-r.1
for
111210043
ghi-r.1
for
107918073
ghi-r.1
for
107938645
cit-r.1
for
102615887
gma-u.5
for
100814557
gma-u.5
for
CHL
vvi-u.5
for
100250424
ppo-u.5
for
18095938
mtr-u.5
for
11429972
sly-u.5
for
101260607
nta-r.1
for
107803353
nta-r.1
for
107763432
osa-u.5
for
4337069
zma-u.5
for
100283155
tae-r.2
for
123190508
tae-r.2
for
123054660
tae-r.2
for
123046808
hvu-r.1
for
123427911
sbi-r.1
for
110436533
bdi-r.1
for
100828257


Ortholog ID: 11333
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly nta nta osa zma tae tae tae hvu sbi bdi
Symbol CHL LOC103873561 LOC106425541 LOC111210043 LOC107918073 LOC107938645 LOC102615887 LOC100814557 CHL LOC100250424 LOC18095938 LOC11429972 LOC101260607 LOC107803353 LOC107763432 LOC4337069 LOC100283155 LOC123190508 LOC123054660 LOC123046808 LOC123427911 LOC110436533 LOC100828257
Function* chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin-like chloroplastic lipocalin chloroplastic lipocalin hypothetical protein chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin-like chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin chloroplastic lipocalin
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 3
ath01230 Biosynthesis of amino acids 2
ath00730 Thiamine metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00030 Pentose phosphate pathway 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
sly01230 Biosynthesis of amino acids 2
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 6
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 3
nta00030 Pentose phosphate pathway 2
nta00710 Carbon fixation by Calvin cycle 2
nta01230 Biosynthesis of amino acids 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823942 103873561 106425541 111210043 107918073 107938645 102615887 100814557 100787880 100250424 18095938 11429972 101260607 107803353 107763432 4337069 100283155 123190508 123054660 123046808 123427911 110436533 100828257
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