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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT3G49740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.9   AT3G49740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.hor   AT3G49740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.lig   AT3G49740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.str   AT3G49740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ath-m.4.tis   AT3G49740   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103860631   pentatricopeptide repeat-containing protein At3g49740 
 bna-r.1   106407458   pentatricopeptide repeat-containing protein At3g49740-like 
 bna-r.1   106439990   pentatricopeptide repeat-containing protein At3g49740-like 
 ghi-r.1   107933901   pentatricopeptide repeat-containing protein At3g49740 
 cit-r.1   102617023   pentatricopeptide repeat-containing protein At3g49740 
 gma-u.5   100818021   pentatricopeptide repeat-containing protein At3g49740 
 vvi-u.5   100242428   pentatricopeptide repeat-containing protein At3g49740 
 sly-u.5   101252589   pentatricopeptide repeat-containing protein At3g49740 
 sot-r.1   102596375   pentatricopeptide repeat-containing protein At3g49740 
 nta-r.1   107786147   pentatricopeptide repeat-containing protein At3g49740 
 nta-r.1   107823559   pentatricopeptide repeat-containing protein At3g49740 

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Top 50 coexpressed genes to AT3G49740 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G49740 (ath-m.4.bio coexpression data)

CoexMap"824136"


athAT3G49740 | Entrez gene ID : 824136      
Species ath bra bna ghi cit gma vvi sly sot nta ppo mtr bdi zma cre hvu sbi osa tae
Paralog 6 1 2 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (230 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_190543.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  cyto 2,  mito 1,  vacu 1,  E.R. 1,  cyto_nucl 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_190543.1)
Subcellular
localization
TargetP
chlo 4  (predict for NP_190543.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT3G49740
ath-m.9
for
AT3G49740
ath-m.4.hor
for
AT3G49740
ath-m.4.lig
for
AT3G49740
ath-m.4.str
for
AT3G49740
ath-m.4.tis
for
AT3G49740
bra-r.6
for
103860631
bna-r.1
for
106407458
bna-r.1
for
106439990
ghi-r.1
for
107933901
cit-r.1
for
102617023
gma-u.5
for
100818021
vvi-u.5
for
100242428
sly-u.5
for
101252589
sot-r.1
for
102596375
nta-r.1
for
107786147
nta-r.1
for
107823559


Ortholog ID: 14029
Species bra bna bna ghi cit gma vvi sly sot nta nta
Symbol LOC103860631 LOC106407458 LOC106439990 LOC107933901 LOC102617023 LOC100818021 LOC100242428 LOC101252589 LOC102596375 LOC107786147 LOC107823559
Function* pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740-like pentatricopeptide repeat-containing protein At3g49740-like pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740 pentatricopeptide repeat-containing protein At3g49740
Coexmap

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Coexpression

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KEGG Info
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103860631 106407458 106439990 107933901 102617023 100818021 100242428 101252589 102596375 107786147 107823559
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