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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   RHA1A   RING-H2 finger A1A 
 ath-u.5   RHA1A   RING-H2 finger A1A 
 ath-r.7   RHA1A   RING-H2 finger A1A 
 ath-m.9   RHA1A   RING-H2 finger A1A 
 ath-e.2   RHA1A   RING-H2 finger A1A 
 ath-m.4.hor   RHA1A   RING-H2 finger A1A 
 ath-m.4.lig   RHA1A   RING-H2 finger A1A 
 ath-m.4.str   RHA1A   RING-H2 finger A1A 
 ath-m.4.tis   RHA1A   RING-H2 finger A1A 
 ath-u.5   RHA1B   RING-H2 finger A1B 
 bra-r.6   103833876   E3 ubiquitin-protein ligase RHA1B 
 bra-r.6   103858600   E3 ubiquitin-protein ligase RHA1B 
 bna-r.1   106385583   E3 ubiquitin-protein ligase RHA1B-like 
 bna-r.1   106422336   E3 ubiquitin-protein ligase RHA1B-like 
 bna-r.1   106443834   E3 ubiquitin-protein ligase RHA1B 

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Top 50 coexpressed genes to RHA1A (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RHA1A (ath-m.4.bio coexpression data)

CoexMap"826739"


athRHA1A | Entrez gene ID : 826739      
Species ath bra bna sbi ghi cre mtr tae cit sot bdi vvi ppo sly zma osa gma nta hvu
Paralog 10 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein NP_192876.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_E.R. 3,  nucl 1,  chlo 1,  extr 1,  cysk 1,  golg 1,  nucl_plas 1  (predict for NP_192876.1)
Subcellular
localization
TargetP
other 5  (predict for NP_192876.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
RHA1A
ath-u.5
for
RHA1A
ath-r.7
for
RHA1A
ath-m.9
for
RHA1A
ath-e.2
for
RHA1A
ath-m.4.hor
for
RHA1A
ath-m.4.lig
for
RHA1A
ath-m.4.str
for
RHA1A
ath-m.4.tis
for
RHA1A
ath-u.5
for
RHA1B
bra-r.6
for
103833876
bra-r.6
for
103858600
bna-r.1
for
106385583
bna-r.1
for
106422336
bna-r.1
for
106443834


Ortholog ID: 16803
Species ath ath bra bra bna bna bna
Symbol RHA1A RHA1B LOC103833876 LOC103858600 LOC106422336 LOC106443834 LOC106445183
Function* RING-H2 finger A1A RING-H2 finger A1B E3 ubiquitin-protein ligase RHA1B E3 ubiquitin-protein ligase RHA1B E3 ubiquitin-protein ligase RHA1B-like E3 ubiquitin-protein ligase RHA1B E3 ubiquitin-protein ligase RHA1B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 3
bra04075 Plant hormone signal transduction 3
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826739 826738 103833876 103858600 106422336 106443834 106445183
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