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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   RR2   response regulator 2 
 ath-u.5   RR2   response regulator 2 
 ath-r.7   RR2   response regulator 2 
 ath-m.9   RR2   response regulator 2 
 ath-e.2   RR2   response regulator 2 
 ath-m.4.hor   RR2   response regulator 2 
 ath-m.4.lig   RR2   response regulator 2 
 ath-m.4.str   RR2   response regulator 2 
 ath-m.4.tis   RR2   response regulator 2 
 ath-u.5   RR1   response regulator 1 
 bra-r.6   103870141   two-component response regulator ARR2 
 bra-r.6   103869728   two-component response regulator ARR1 
 bra-r.6   103859684   two-component response regulator ARR1 
 bna-r.1   106411444   two-component response regulator ARR2 
 bna-r.1   111214639   two-component response regulator ARR1-like 
 bna-r.1   106358153   two-component response regulator ARR1 
 ghi-r.1   107916188   two-component response regulator ARR2 
 ghi-r.1   107926502   two-component response regulator ARR2 
 ghi-r.1   107936099   two-component response regulator ARR2 
 cit-r.1   102607197   two-component response regulator ARR2 
 gma-u.5   100814930   two-component response regulator ARR2 
 gma-u.5   100809583   two-component response regulator ARR2 
 gma-u.5   100781102   two-component response regulator ARR2 
 vvi-u.5   100263661   two-component response regulator ARR1 
 ppo-u.5   7477193   two-component response regulator ARR2 
 ppo-u.5   18101870   two-component response regulator ARR2 
 mtr-u.5   11420048   two-component response regulator ARR2 
 mtr-u.5   25494105   two-component response regulator ARR2 
 sly-u.5   101267446   two-component response regulator ARR2 
 sly-u.5   101266334   two-component response regulator ARR1 
 sot-r.1   102586468   two-component response regulator ARR1-like 
 sot-r.1   102578736   two-component response regulator ARR2-like 
 nta-r.1   107802370   two-component response regulator ARR1 
 nta-r.1   107775114   two-component response regulator ARR2-like 
 nta-r.1   107806685   two-component response regulator ARR1-like 

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Top 50 coexpressed genes to RR2 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RR2 (ath-m.4.bio coexpression data)

CoexMap"827297"


athRR2 | Entrez gene ID : 827297    
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 10 3 3 3 1 3 1 2 2 2 2 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0080113 [list] [network] regulation of seed growth  (13 genes)  IMP  
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IMP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (61 genes)  IMP  
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (66 genes)  TAS  
GO:0071368 [list] [network] cellular response to cytokinin stimulus  (72 genes)  IMP  
GO:0010119 [list] [network] regulation of stomatal movement  (113 genes)  IMP  
GO:0009735 [list] [network] response to cytokinin  (124 genes)  IEP IGI  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IMP  
GO:0009723 [list] [network] response to ethylene  (170 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0000156 [list] [network] phosphorelay response regulator activity  (33 genes)  ISS  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_193346.5 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_193346.5)
Subcellular
localization
TargetP
other 7  (predict for NP_193346.5)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
RR2
ath-u.5
for
RR2
ath-r.7
for
RR2
ath-m.9
for
RR2
ath-e.2
for
RR2
ath-m.4.hor
for
RR2
ath-m.4.lig
for
RR2
ath-m.4.str
for
RR2
ath-m.4.tis
for
RR2
ath-u.5
for
RR1
bra-r.6
for
103870141
bra-r.6
for
103869728
bra-r.6
for
103859684
bna-r.1
for
106411444
bna-r.1
for
111214639
bna-r.1
for
106358153
ghi-r.1
for
107916188
ghi-r.1
for
107926502
ghi-r.1
for
107936099
cit-r.1
for
102607197
gma-u.5
for
100814930
gma-u.5
for
100809583
gma-u.5
for
100781102
vvi-u.5
for
100263661
ppo-u.5
for
7477193
ppo-u.5
for
18101870
mtr-u.5
for
11420048
mtr-u.5
for
25494105
sly-u.5
for
101267446
sly-u.5
for
101266334
sot-r.1
for
102586468
sot-r.1
for
102578736
nta-r.1
for
107802370
nta-r.1
for
107775114
nta-r.1
for
107806685


Ortholog ID: 4910
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta
Symbol RR2 RR1 LOC103870141 LOC103869728 LOC117132498 LOC106376222 LOC106360849 LOC106439443 LOC107936099 LOC107936125 LOC107896631 LOC102607197 LOC100814930 LOC100781102 LOC100781087 LOC100263661 LOC7477193 LOC18101870 LOC11420048 LOC25494105 LOC101267446 LOC101266334 LOC102586468 LOC102578736 LOC107802370 LOC107775114 LOC107807556
Function* response regulator 2 response regulator 1 two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR1 two-component response regulator ARR2 two-component response regulator ARR2-like two-component response regulator ARR1-like two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR2 two-component response regulator ARR1 two-component response regulator ARR1-like two-component response regulator ARR2-like two-component response regulator ARR1 two-component response regulator ARR2-like two-component response regulator ARR2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 4
bra00071 Fatty acid degradation 2
bra00310 Lysine degradation 2
bra00380 Tryptophan metabolism 2
bra00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 3
gma04144 Endocytosis 3
gma05100 Bacterial invasion of epithelial cells 3
gma04075 Plant hormone signal transduction 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 5
sot05100 Bacterial invasion of epithelial cells 3
sot04142 Lysosome 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827297 820940 103870141 103869728 117132498 106376222 106360849 106439443 107936099 107936125 107896631 102607197 100814930 100781102 100781087 100263661 7477193 18101870 11420048 25494105 101267446 101266334 102586468 102578736 107802370 107775114 107807556
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