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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT4G32060   calcium-binding EF hand family protein 
 ath-u.5   AT4G32060   calcium-binding EF hand family protein 
 ath-r.7   AT4G32060   calcium-binding EF hand family protein 
 ath-m.9   AT4G32060   calcium-binding EF hand family protein 
 ath-e.2   AT4G32060   calcium-binding EF hand family protein 
 ath-m.4.hor   AT4G32060   calcium-binding EF hand family protein 
 ath-m.4.lig   AT4G32060   calcium-binding EF hand family protein 
 ath-m.4.str   AT4G32060   calcium-binding EF hand family protein 
 ath-m.4.tis   AT4G32060   calcium-binding EF hand family protein 
 bra-r.6   103851312   calcium uptake protein, mitochondrial 
 bna-r.1   125575008   calcium uptake protein, mitochondrial-like 
 bna-r.1   106371302   calcium uptake protein, mitochondrial 
 ghi-r.1   107962910   calcium uptake protein, mitochondrial 
 ghi-r.1   121218325   calcium uptake protein, mitochondrial 
 cit-r.1   102611398   calcium uptake protein, mitochondrial 
 gma-u.5   100817395   calcium uptake protein, mitochondrial 
 gma-u.5   100808456   calcium uptake protein, mitochondrial 
 gma-u.5   100806575   calcium uptake protein, mitochondrial 
 vvi-u.5   100246594   calcium uptake protein, mitochondrial 
 vvi-u.5   100854243   calcium uptake protein, mitochondrial 
 ppo-u.5   7458391   calcium uptake protein, mitochondrial 
 mtr-u.5   11446684   calcium uptake protein, mitochondrial 
 mtr-u.5   11436605   calcium uptake protein, mitochondrial 
 mtr-u.5   25481930   calcium uptake protein, mitochondrial 
 sly-u.5   101268399   mitochondrial calcium uniporter complex protein-like 
 sot-r.1   102604730   calcium uptake protein 1, mitochondrial-like 
 nta-r.1   107764571   calcium uptake protein, mitochondrial 
 nta-r.1   107766845   calcium uptake protein, mitochondrial-like 
 nta-r.1   107768871   calcium uptake protein, mitochondrial 
 osa-u.5   4329968   calcium uptake protein, mitochondrial 
 osa-u.5   4336319   calcium uptake protein, mitochondrial 
 zma-u.5   103627407   calcium uptake protein, mitochondrial 
 zma-u.5   100274368   uncharacterized LOC100274368 
 zma-u.5   100280730   calcium binding atopy-related autoantigen 1 
 tae-r.2   123144809   calcium uptake protein, mitochondrial 
 tae-r.2   123137453   calcium uptake protein, mitochondrial 
 tae-r.2   123127789   calcium uptake protein, mitochondrial 
 hvu-r.1   123427171   calcium uptake protein, mitochondrial-like 
 hvu-r.1   123403264   calcium uptake protein, mitochondrial-like 
 sbi-r.1   8059679   calcium uptake protein, mitochondrial 
 sbi-r.1   8075896   calcium uptake protein, mitochondrial 
 bdi-r.1   100835432   calcium uptake protein, mitochondrial 
 bdi-r.1   100831007   calcium uptake protein, mitochondrial 
 cre-r.1   CHLRE_12g499350v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G32060 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G32060 (ath-m.4.bio coexpression data)

CoexMap"829337"


athAT4G32060 | Entrez gene ID : 829337      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 3 2 1 3 1 1 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051562 [list] [network] negative regulation of mitochondrial calcium ion concentration  (1 genes)  IMP  
GO:0006816 [list] [network] calcium ion transport  (56 genes)  IDA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  IDA IMP  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0005509 [list] [network] calcium ion binding  (158 genes)  IDA  
Protein NP_001078476.1 [sequence] [blastp]
NP_194934.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  nucl 3  (predict for NP_001078476.1)
chlo 6,  chlo_mito 4,  nucl 2  (predict for NP_194934.1)
Subcellular
localization
TargetP
chlo 5  (predict for NP_001078476.1)
chlo 5  (predict for NP_194934.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT4G32060
ath-u.5
for
AT4G32060
ath-r.7
for
AT4G32060
ath-m.9
for
AT4G32060
ath-e.2
for
AT4G32060
ath-m.4.hor
for
AT4G32060
ath-m.4.lig
for
AT4G32060
ath-m.4.str
for
AT4G32060
ath-m.4.tis
for
AT4G32060
bra-r.6
for
103851312
bna-r.1
for
125575008
bna-r.1
for
106371302
ghi-r.1
for
107962910
ghi-r.1
for
121218325
cit-r.1
for
102611398
gma-u.5
for
100817395
gma-u.5
for
100808456
gma-u.5
for
100806575
vvi-u.5
for
100246594
vvi-u.5
for
100854243
ppo-u.5
for
7458391
mtr-u.5
for
11446684
mtr-u.5
for
11436605
mtr-u.5
for
25481930
sly-u.5
for
101268399
sot-r.1
for
102604730
nta-r.1
for
107764571
nta-r.1
for
107766845
nta-r.1
for
107768871
osa-u.5
for
4329968
osa-u.5
for
4336319
zma-u.5
for
103627407
zma-u.5
for
100274368
zma-u.5
for
100280730
tae-r.2
for
123144809
tae-r.2
for
123137453
tae-r.2
for
123127789
hvu-r.1
for
123427171
hvu-r.1
for
123403264
sbi-r.1
for
8059679
sbi-r.1
for
8075896
bdi-r.1
for
100835432
bdi-r.1
for
100831007
cre-r.1
for
CHLRE_12g499350v5


Ortholog ID: 3367
Species ath bra bna bna ghi ghi cit gma gma vvi vvi ppo mtr mtr mtr sly sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT4G32060 LOC103851312 LOC125575008 LOC106371302 LOC121218325 LOC107888403 LOC102611398 LOC100808456 LOC100806575 LOC100246594 LOC100854243 LOC7458391 LOC11446684 LOC11436605 LOC25481930 LOC101268399 LOC102604730 LOC107764571 LOC107766845 LOC107768871 LOC4329968 LOC4336319 LOC103627407 LOC100274368 LOC100280730 LOC123144809 LOC123137453 LOC123189686 LOC123427171 LOC123403264 LOC8059679 LOC8075896 LOC100835432 LOC100831007 CHLRE_12g499350v5
Function* calcium-binding EF hand family protein calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial-like calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial mitochondrial calcium uniporter complex protein-like calcium uptake protein 1, mitochondrial-like calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial-like calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial uncharacterized LOC100274368 calcium binding atopy-related autoantigen 1 calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial-like calcium uptake protein, mitochondrial-like calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial calcium uptake protein, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 5
mtr00190 Oxidative phosphorylation 4
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00564 Glycerophospholipid metabolism 2
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 3
nta04130 SNARE interactions in vesicular transport 2
nta00511 Other glycan degradation 2
nta00513 Various types of N-glycan biosynthesis 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 4
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta01230 Biosynthesis of amino acids 2
nta01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 3
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00620 Pyruvate metabolism 4
zma00010 Glycolysis / Gluconeogenesis 3
zma00020 Citrate cycle (TCA cycle) 3
zma00785 Lipoic acid metabolism 3
zma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 8
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829337 103851312 125575008 106371302 121218325 107888403 102611398 100808456 100806575 100246594 100854243 7458391 11446684 11436605 25481930 101268399 102604730 107764571 107766845 107768871 4329968 4336319 103627407 100274368 100280730 123144809 123137453 123189686 123427171 123403264 8059679 8075896 100835432 100831007 5727878
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