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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   EMB3137   Ribosomal protein S13/S18 family 
 ath-u.5   EMB3137   Ribosomal protein S13/S18 family 
 ath-r.7   EMB3137   Ribosomal protein S13/S18 family 
 ath-m.9   EMB3137   Ribosomal protein S13/S18 family 
 ath-e.2   EMB3137   Ribosomal protein S13/S18 family 
 ath-m.4.hor   EMB3137   Ribosomal protein S13/S18 family 
 ath-m.4.lig   EMB3137   Ribosomal protein S13/S18 family 
 ath-m.4.str   EMB3137   Ribosomal protein S13/S18 family 
 ath-m.4.tis   EMB3137   Ribosomal protein S13/S18 family 
 bra-r.6   103856071   30S ribosomal protein S13, chloroplastic 
 bra-r.6   103846495   30S ribosomal protein S13, chloroplastic 
 bna-r.1   106367222   30S ribosomal protein S13, chloroplastic-like 
 bna-r.1   106372067   30S ribosomal protein S13, chloroplastic-like 
 bna-r.1   106418399   30S ribosomal protein S13, chloroplastic 
 ghi-r.1   107910261   30S ribosomal protein S13, chloroplastic 
 ghi-r.1   107951440   30S ribosomal protein S13, chloroplastic 
 cit-r.1   102612251   30S ribosomal protein S13, chloroplastic 
 gma-u.5   100500355   30S ribosomal protein S13 
 gma-u.5   100499902   30S ribosomal protein S13, chloroplastic 
 vvi-u.5   100254016   small ribosomal subunit protein uS13c 
 ppo-u.5   7495117   30S ribosomal protein S13, chloroplastic 
 ppo-u.5   7469127   30S ribosomal protein S13, chloroplastic 
 mtr-u.5   11406792   30S ribosomal protein S13, chloroplastic 
 sly-u.5   101260136   30S ribosomal protein S13 
 sot-r.1   102582667   30S ribosomal protein S13, chloroplastic 
 nta-r.1   107812601   small ribosomal subunit protein uS13c-like 
 nta-r.1   107823491   small ribosomal subunit protein uS13c 
 osa-u.5   4333848   small ribosomal subunit protein uS13c 
 zma-u.5   100283244   30S ribosomal protein S13, chloroplastic-like 
 tae-r.2   123090813   30S ribosomal protein S13, chloroplastic 
 tae-r.2   123095823   30S ribosomal protein S13, chloroplastic 
 hvu-r.1   123409273   30S ribosomal protein S13, chloroplastic-like 
 hvu-r.1   123447354   30S ribosomal protein S13, chloroplastic-like 
 sbi-r.1   110436562   30S ribosomal protein S13, chloroplastic-like 
 bdi-r.1   100833335   30S ribosomal protein S13, chloroplastic 
 cre-r.1   CHLRE_12g493950v5   uncharacterized protein 

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Top 50 coexpressed genes to EMB3137 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EMB3137 (ath-m.4.bio coexpression data)

CoexMap"831282"


athEMB3137 | Entrez gene ID : 831282      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 2 1 1 1 2 1 1 2 2 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (75 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001119224.1 [sequence] [blastp]
NP_568299.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001119224.1)
chlo 10  (predict for NP_568299.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001119224.1)
chlo 9  (predict for NP_568299.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
EMB3137
ath-u.5
for
EMB3137
ath-r.7
for
EMB3137
ath-m.9
for
EMB3137
ath-e.2
for
EMB3137
ath-m.4.hor
for
EMB3137
ath-m.4.lig
for
EMB3137
ath-m.4.str
for
EMB3137
ath-m.4.tis
for
EMB3137
bra-r.6
for
103856071
bra-r.6
for
103846495
bna-r.1
for
106367222
bna-r.1
for
106372067
bna-r.1
for
106418399
ghi-r.1
for
107910261
ghi-r.1
for
107951440
cit-r.1
for
102612251
gma-u.5
for
100500355
gma-u.5
for
100499902
vvi-u.5
for
100254016
ppo-u.5
for
7495117
ppo-u.5
for
7469127
mtr-u.5
for
11406792
sly-u.5
for
101260136
sot-r.1
for
102582667
nta-r.1
for
107812601
nta-r.1
for
107823491
osa-u.5
for
4333848
zma-u.5
for
100283244
tae-r.2
for
123090813
tae-r.2
for
123095823
hvu-r.1
for
123409273
hvu-r.1
for
123447354
sbi-r.1
for
110436562
bdi-r.1
for
100833335
cre-r.1
for
CHLRE_12g493950v5


Ortholog ID: 5831
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu hvu sbi bdi cre
Symbol EMB3137 LOC103856071 LOC103846495 LOC106418399 LOC106431539 LOC111201472 LOC107910261 LOC107951440 LOC102612251 LOC100500355 LOC100499902 LOC100254016 LOC7495117 LOC7469127 LOC11406792 LOC101260136 LOC102582667 LOC107812601 LOC107823491 LOC4333848 LOC100283244 LOC123095823 LOC123087150 LOC123409273 LOC123447354 LOC110436562 LOC100833335 CHLRE_12g493950v5
Function* Ribosomal protein S13/S18 family 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13 30S ribosomal protein S13, chloroplastic small ribosomal subunit protein uS13c 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13 30S ribosomal protein S13, chloroplastic small ribosomal subunit protein uS13c-like small ribosomal subunit protein uS13c small ribosomal subunit protein uS13c 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic-like 30S ribosomal protein S13, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 14
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831282 103856071 103846495 106418399 106431539 111201472 107910261 107951440 102612251 100500355 100499902 100254016 7495117 7469127 11406792 101260136 102582667 107812601 107823491 4333848 100283244 123095823 123087150 123409273 123447354 110436562 100833335 5726085
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