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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   MAM1   methylthioalkylmalate synthase 1 
 ath-u.5   MAM1   methylthioalkylmalate synthase 1 
 ath-r.7   MAM1   methylthioalkylmalate synthase 1 
 ath-m.9   MAM1   methylthioalkylmalate synthase 1 
 ath-e.2   MAM1   methylthioalkylmalate synthase 1 
 ath-m.4.hor   MAM1   methylthioalkylmalate synthase 1 
 ath-m.4.lig   MAM1   methylthioalkylmalate synthase 1 
 ath-m.4.str   MAM1   methylthioalkylmalate synthase 1 
 ath-m.4.tis   MAM1   methylthioalkylmalate synthase 1 
 ath-u.5   IMS2   2-isopropylmalate synthase 2 
 bra-r.6   103854915   methylthioalkylmalate synthase 1, chloroplastic 
 bra-r.6   103861112   methylthioalkylmalate synthase 2, chloroplastic 
 bna-r.1   106377268   methylthioalkylmalate synthase 2, chloroplastic 
 bna-r.1   106382716   methylthioalkylmalate synthase 1, chloroplastic-like 
 bna-r.1   106434595   methylthioalkylmalate synthase 2, chloroplastic-like 

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Top 50 coexpressed genes to MAM1 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MAM1 (ath-m.4.bio coexpression data)

CoexMap"832365"


athMAM1 | Entrez gene ID : 832365      
Species ath bra bna zma ghi nta vvi osa sot hvu gma tae sly bdi ppo cit sbi mtr cre
Paralog 10 2 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00966 [list] [network] Glucosinolate biosynthesis (26 genes)
ath01210 [list] [network] 2-Oxocarboxylic acid metabolism (103 genes)
GO BP
GO:0019761 [list] [network] glucosinolate biosynthetic process  (43 genes)  IDA IGI IMP  
GO:0009625 [list] [network] response to insect  (66 genes)  IEP  
GO:0009414 [list] [network] response to water deprivation  (426 genes)  IEP  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM ISS  
GO MF
GO:0010177 [list] [network] methylthioalkylmalate synthase activity  (2 genes)  IDA  
GO:0003852 [list] [network] 2-isopropylmalate synthase activity  (4 genes)  IGI  
Protein NP_001330047.1 [sequence] [blastp]
NP_001330048.1 [sequence] [blastp]
NP_197692.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for NP_001330047.1)
chlo 9,  nucl 1,  E.R. 1  (predict for NP_001330048.1)
chlo 10  (predict for NP_197692.1)
Subcellular
localization
TargetP
scret 2  (predict for NP_001330047.1)
chlo 9  (predict for NP_001330048.1)
chlo 9  (predict for NP_197692.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
MAM1
ath-u.5
for
MAM1
ath-r.7
for
MAM1
ath-m.9
for
MAM1
ath-e.2
for
MAM1
ath-m.4.hor
for
MAM1
ath-m.4.lig
for
MAM1
ath-m.4.str
for
MAM1
ath-m.4.tis
for
MAM1
ath-u.5
for
IMS2
bra-r.6
for
103854915
bra-r.6
for
103861112
bna-r.1
for
106377268
bna-r.1
for
106382716
bna-r.1
for
106434595


Ortholog ID: 15859
Species ath ath bra bra bna bna bna
Symbol MAM1 IMS2 LOC103854915 LOC103861112 LOC106377268 LOC106434595 LOC106434598
Function* methylthioalkylmalate synthase 1 2-isopropylmalate synthase 2 methylthioalkylmalate synthase 1, chloroplastic methylthioalkylmalate synthase 2, chloroplastic methylthioalkylmalate synthase 2, chloroplastic methylthioalkylmalate synthase 2, chloroplastic-like methylthioalkylmalate synthase 2, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 9
ath01210 2-Oxocarboxylic acid metabolism 9
ath00290 Valine, leucine and isoleucine biosynthesis 3
ath00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 10
ath01210 2-Oxocarboxylic acid metabolism 10
ath00290 Valine, leucine and isoleucine biosynthesis 3
ath00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 10
bra00966 Glucosinolate biosynthesis 10
bra00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01210 2-Oxocarboxylic acid metabolism 6
bra00966 Glucosinolate biosynthesis 5
bra00270 Cysteine and methionine metabolism 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01210 2-Oxocarboxylic acid metabolism 10
bna00966 Glucosinolate biosynthesis 8
bna04016 MAPK signaling pathway - plant 2
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01210 2-Oxocarboxylic acid metabolism 13
bna00966 Glucosinolate biosynthesis 11
bna00290 Valine, leucine and isoleucine biosynthesis 3
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01210 2-Oxocarboxylic acid metabolism 11
bna00966 Glucosinolate biosynthesis 9
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832365 832366 103854915 103861112 106377268 106434595 106434598
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