ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.bio	AT5G50360	von willebrand factor A domain protein
ath-u.5	AT5G50360	von willebrand factor A domain protein
ath-r.7	AT5G50360	von willebrand factor A domain protein
ath-m.9	AT5G50360	von willebrand factor A domain protein
ath-e.2	AT5G50360	von willebrand factor A domain protein
ath-m.4.hor	AT5G50360	von willebrand factor A domain protein
ath-m.4.lig	AT5G50360	von willebrand factor A domain protein
ath-m.4.str	AT5G50360	von willebrand factor A domain protein
ath-m.4.tis	AT5G50360	von willebrand factor A domain protein
ath-u.5	AT3G27250	uncharacterized protein
ath-u.5	AT3G48510	AtIII18x5-like protein
bra-r.6	103852195	uncharacterized LOC103852195
bra-r.6	103875234	uncharacterized LOC103875234
bra-r.6	103874689	uncharacterized LOC103874689
bna-r.1	106414854	uncharacterized LOC106414854
ghi-r.1	107895985	uncharacterized LOC107895985
ghi-r.1	107895537	uncharacterized LOC107895537
ghi-r.1	107892184	uncharacterized LOC107892184
cit-r.1	102622140	hypothetical protein
cit-r.1	102614992	uncharacterized LOC102614992
cit-r.1	102626101	uncharacterized LOC102626101
gma-u.5	100812834	uncharacterized LOC100812834
gma-u.5	102667957	uncharacterized LOC102667957
gma-u.5	102664115	uncharacterized LOC102664115
vvi-u.5	100249110	uncharacterized LOC100249110
vvi-u.5	100244084	uncharacterized LOC100244084
ppo-u.5	7454690	uncharacterized LOC7454690
ppo-u.5	7454532	uncharacterized LOC7454532
ppo-u.5	7456215	uncharacterized LOC7456215
mtr-u.5	11412046	uncharacterized LOC11412046
mtr-u.5	11420081	uncharacterized LOC11420081
mtr-u.5	25489493	uncharacterized LOC25489493
sly-u.5	101267981	uncharacterized LOC101267981
sly-u.5	104645665	uncharacterized LOC104645665
sly-u.5	101250767	uncharacterized LOC101250767
sot-r.1	102590433	uncharacterized LOC102590433
sot-r.1	102597777	uncharacterized LOC102597777
sot-r.1	102599410	uncharacterized LOC102599410
nta-r.1	107760464	uncharacterized LOC107760464
nta-r.1	107804873	uncharacterized LOC107804873
osa-u.5	9268826	uncharacterized LOC9268826
zma-u.5	100277012	uncharacterized LOC100277012
tae-r.2	123074525	uncharacterized LOC123074525
tae-r.2	123061439	uncharacterized LOC123061439
hvu-r.1	123439951	uncharacterized LOC123439951
sbi-r.1	8086147	tropomyosin-1
bdi-r.1	100843499	translation initiation factor IF-2

Top 50 coexpressed genes to AT5G50360 (ath-m.4.bio coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT5G50360 (ath-m.4.bio coexpression data)

CoexMap"835103"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:2000143 [list] [network] negative regulation of DNA-templated transcription initiation

(6 genes)

IDA

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

IDA ISM

GO MF

Protein

NP_199847.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, chlo 1

(predict for NP_199847.1)

Subcellular
localization
TargetP

mito 3, other 3

(predict for NP_199847.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.bio for AT5G50360	ath-u.5 for AT5G50360	ath-r.7 for AT5G50360	ath-m.9 for AT5G50360	ath-e.2 for AT5G50360	ath-m.4.hor for AT5G50360	ath-m.4.lig for AT5G50360	ath-m.4.str for AT5G50360	ath-m.4.tis for AT5G50360	ath-u.5 for AT3G27250	ath-u.5 for AT3G48510	bra-r.6 for 103852195	bra-r.6 for 103875234	bra-r.6 for 103874689	bna-r.1 for 106414854	ghi-r.1 for 107895985	ghi-r.1 for 107895537	ghi-r.1 for 107892184	cit-r.1 for 102622140	cit-r.1 for 102614992	cit-r.1 for 102626101	gma-u.5 for 100812834	gma-u.5 for 102667957	gma-u.5 for 102664115	vvi-u.5 for 100249110	vvi-u.5 for 100244084	ppo-u.5 for 7454690	ppo-u.5 for 7454532	ppo-u.5 for 7456215	mtr-u.5 for 11412046	mtr-u.5 for 11420081	mtr-u.5 for 25489493	sly-u.5 for 101267981	sly-u.5 for 104645665	sly-u.5 for 101250767	sot-r.1 for 102590433	sot-r.1 for 102597777	sot-r.1 for 102599410	nta-r.1 for 107760464	nta-r.1 for 107804873	osa-u.5 for 9268826	zma-u.5 for 100277012	tae-r.2 for 123074525	tae-r.2 for 123061439	hvu-r.1 for 123439951	sbi-r.1 for 8086147	bdi-r.1 for 100843499

Ortholog

Ortholog ID: 1110

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

von willebrand factor A domain protein

uncharacterized protein

uncharacterized LOC103852195

uncharacterized LOC103875234

uncharacterized LOC103874689

uncharacterized LOC106414854

uncharacterized LOC107914770

uncharacterized LOC107915317

uncharacterized LOC121219328

hypothetical protein

uncharacterized LOC102614992

uncharacterized LOC102626101

uncharacterized LOC100812834

uncharacterized LOC102663301

uncharacterized LOC100249110

uncharacterized LOC100244084

uncharacterized LOC7454690

uncharacterized LOC7454532

uncharacterized LOC7456215

uncharacterized LOC11412046

uncharacterized LOC11420081

uncharacterized LOC25489493

uncharacterized LOC101267981

uncharacterized LOC104645665

uncharacterized LOC101250767

uncharacterized LOC102590433

uncharacterized LOC102597777

uncharacterized LOC102599410

uncharacterized LOC107760464

uncharacterized LOC107815750

uncharacterized LOC107770126

uncharacterized LOC9268826

uncharacterized LOC100277012

uncharacterized LOC123074525

uncharacterized LOC123061439

uncharacterized LOC123439951

tropomyosin-1

translation initiation factor IF-2

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	6
ath04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	3
ath04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00330	Arginine and proline metabolism	4
bra01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	4
cit04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00061	Fatty acid biosynthesis	3
cit01040	Biosynthesis of unsaturated fatty acids	3
cit01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	4
cit04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	5
gma04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04016	MAPK signaling pathway - plant	6
gma04075	Plant hormone signal transduction	6
gma00500	Starch and sucrose metabolism	2
gma00906	Carotenoid biosynthesis	2
gma02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	5
vvi04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	5
vvi04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	4
ppo04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	4
ppo04016	MAPK signaling pathway - plant	3
ppo00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	8
ppo04016	MAPK signaling pathway - plant	6
ppo00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3
mtr04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	8
sly04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	6
sly04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	9
sly04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	6
sot04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot04016	MAPK signaling pathway - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	8
sot04016	MAPK signaling pathway - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	7
nta04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	7
nta04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	7
osa04016	MAPK signaling pathway - plant	5
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	7
zma04075	Plant hormone signal transduction	7
zma00240	Pyrimidine metabolism	2
zma01232	Nucleotide metabolism	2
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	6
tae04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	8
tae04075	Plant hormone signal transduction	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	6
hvu04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	6
sbi04016	MAPK signaling pathway - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6
bdi04016	MAPK signaling pathway - plant	5

Expression

Expression pattern

Entrez Gene ID^*

835103

834080

103852195

103875234

103874689

106414854

107914770

107915317

121219328

102622140

102614992

102626101

100812834

102663301

100249110

100244084

7454690

7454532

7456215

11412046

11420081

25489493

101267981

104645665

101250767

102590433

102597777

102599410

107760464

107815750

107770126

9268826

100277012

123074525

123061439

123439951

8086147

100843499

The preparation time of this page was 0.1 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	3	1	3	3	3	2	3	3	3	3	2	1	1	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G50360 (ath-m.4.bio coexpression data)

Top 50 enrichment test to AT5G50360 (ath-m.4.bio coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**