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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-u.5   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-r.7   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-m.9   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-e.2   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-m.4.hor   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-m.4.lig   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-m.4.str   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-m.4.tis   AT5G50460   secE/sec61-gamma protein transport protein 
 ath-u.5   AT3G48570   secE/sec61-gamma protein transport protein 
 bra-r.6   103873129   protein transport protein Sec61 subunit gamma-3 
 bra-r.6   103862711   protein transport protein Sec61 subunit gamma-1 
 bra-r.6   103852189   protein transport protein Sec61 subunit gamma-1 
 bna-r.1   106442417   protein transport protein Sec61 subunit gamma-1 
 bna-r.1   106347011   protein transport protein Sec61 subunit gamma-1 
 bna-r.1   111213824   protein transport protein Sec61 subunit gamma-3 
 ghi-r.1   107899725   protein transport protein Sec61 subunit gamma 
 ghi-r.1   107922879   protein transport protein Sec61 subunit gamma 
 ghi-r.1   107897288   protein transport protein Sec61 subunit gamma 
 cit-r.1   102612236   protein transport protein Sec61 subunit gamma 
 gma-u.5   100527335   transport protein Sec61 subunit gamma 
 gma-u.5   100306386   protein transport protein Sec61 subunit gamma 
 gma-u.5   100805604   protein transport protein Sec61 subunit gamma 
 ppo-u.5   7454723   protein transport protein Sec61 subunit gamma 
 ppo-u.5   7454559   protein transport protein Sec61 subunit gamma-1 
 mtr-u.5   11446014   protein transport protein Sec61 subunit gamma 
 mtr-u.5   11424024   protein transport protein Sec61 subunit gamma 
 sly-u.5   101247903   protein transport protein Sec61 subunit gamma-1 
 sly-u.5   101243898   protein transport protein Sec61 subunit gamma-1-like 
 sot-r.1   102596779   protein transport protein Sec61 subunit gamma-1 
 sot-r.1   102603715   protein transport protein Sec61 subunit gamma-1-like 
 osa-u.5   4328492   protein transport protein Sec61 subunit gamma-like 
 zma-u.5   100284544   protein transport protein SEC61 gamma subunit 
 zma-u.5   100282298   protein transport protein SEC61 gamma subunit 
 zma-u.5   100280916   protein transport protein SEC61 gamma subunit 
 tae-r.2   123144089   protein transport protein Sec61 subunit gamma 
 tae-r.2   123136576   protein transport protein Sec61 subunit gamma 
 hvu-r.1   123402761   protein transport protein Sec61 subunit gamma-like 
 sbi-r.1   8079395   protein transport protein Sec61 subunit gamma 
 sbi-r.1   8069358   protein transport protein Sec61 subunit gamma 
 bdi-r.1   100827752   protein transport protein Sec61 subunit gamma 
 bdi-r.1   100832867   protein transport protein Sec61 subunit gamma 
 cre-r.1   CHLRE_16g680230v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G50460 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G50460 (ath-m.4.bio coexpression data)

CoexMap"835114"


athAT5G50460 | Entrez gene ID : 835114    
Species ath bra bna ghi cit gma ppo mtr sly sot osa zma tae hvu sbi bdi cre nta vvi
Paralog 10 3 3 3 1 3 2 2 2 2 1 3 2 1 2 2 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03060 [list] [network] Protein export (62 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (220 genes)
ath04145 [list] [network] Phagosome (87 genes)
GO BP
GO CC
GO:0009536 [list] [network] plastid  (5443 genes)  HDA  
GO:0005622 [list] [network] intracellular anatomical structure  (21227 genes)  ISS  
GO MF
Protein NP_568728.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  plas 2,  chlo 1  (predict for NP_568728.1)
Subcellular
localization
TargetP
other 9  (predict for NP_568728.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AT5G50460
ath-u.5
for
AT5G50460
ath-r.7
for
AT5G50460
ath-m.9
for
AT5G50460
ath-e.2
for
AT5G50460
ath-m.4.hor
for
AT5G50460
ath-m.4.lig
for
AT5G50460
ath-m.4.str
for
AT5G50460
ath-m.4.tis
for
AT5G50460
ath-u.5
for
AT3G48570
bra-r.6
for
103873129
bra-r.6
for
103862711
bra-r.6
for
103852189
bna-r.1
for
106442417
bna-r.1
for
106347011
bna-r.1
for
111213824
ghi-r.1
for
107899725
ghi-r.1
for
107922879
ghi-r.1
for
107897288
cit-r.1
for
102612236
gma-u.5
for
100527335
gma-u.5
for
100306386
gma-u.5
for
100805604
ppo-u.5
for
7454723
ppo-u.5
for
7454559
mtr-u.5
for
11446014
mtr-u.5
for
11424024
sly-u.5
for
101247903
sly-u.5
for
101243898
sot-r.1
for
102596779
sot-r.1
for
102603715
osa-u.5
for
4328492
zma-u.5
for
100284544
zma-u.5
for
100282298
zma-u.5
for
100280916
tae-r.2
for
123144089
tae-r.2
for
123136576
hvu-r.1
for
123402761
sbi-r.1
for
8079395
sbi-r.1
for
8069358
bdi-r.1
for
100827752
bdi-r.1
for
100832867
cre-r.1
for
CHLRE_16g680230v5


Ortholog ID: 1239
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma ppo ppo mtr mtr sly sly sot sot osa zma zma zma hvu hvu sbi sbi bdi bdi cre
Symbol AT5G50460 AT3G48570 LOC103873129 LOC103858453 LOC103861513 LOC106347011 LOC111213824 LOC106374443 LOC107937089 LOC107911752 LOC107904824 LOC102612236 LOC100306386 LOC100805604 LOC100789824 LOC7454723 LOC7454559 LOC11446014 LOC11424024 LOC101247903 LOC101243898 LOC102596779 LOC102603715 LOC4328492 LOC100284544 LOC100280916 LOC100192024 LOC123402761 LOC123412002 LOC8079395 LOC8069358 LOC100827752 LOC100832867 CHLRE_16g680230v5
Function* secE/sec61-gamma protein transport protein secE/sec61-gamma protein transport protein protein transport protein Sec61 subunit gamma-3 protein transport protein Sec61 subunit gamma-1 protein transport protein Sec61 subunit gamma-1 protein transport protein Sec61 subunit gamma-1 protein transport protein Sec61 subunit gamma-3 protein transport protein Sec61 subunit gamma-1 protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma-1 protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma-1 protein transport protein Sec61 subunit gamma-1-like protein transport protein Sec61 subunit gamma-1 protein transport protein Sec61 subunit gamma-1-like protein transport protein Sec61 subunit gamma-like protein transport protein SEC61 gamma subunit protein transport protein SEC61 gamma subunit uncharacterized LOC100192024 protein transport protein Sec61 subunit gamma-like protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma protein transport protein Sec61 subunit gamma uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 12
ath04145 Phagosome 7
ath03060 Protein export 6
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 6
ath03060 Protein export 5
ath04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03040 Spliceosome 2
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 13
bra04145 Phagosome 5
bra03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 8
bna04141 Protein processing in endoplasmic reticulum 8
bna04145 Phagosome 8
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 12
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 8
bna04141 Protein processing in endoplasmic reticulum 8
bna04145 Phagosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03060 Protein export 3
ghi04145 Phagosome 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi04145 Phagosome 4
ghi00860 Porphyrin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03060 Protein export 3
ghi04145 Phagosome 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 3
cit03060 Protein export 2
cit04141 Protein processing in endoplasmic reticulum 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma04141 Protein processing in endoplasmic reticulum 4
gma03060 Protein export 3
gma04145 Phagosome 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 10
gma03060 Protein export 6
gma04145 Phagosome 4
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03060 Protein export 3
gma04141 Protein processing in endoplasmic reticulum 3
gma04145 Phagosome 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 7
mtr03060 Protein export 5
mtr04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 11
mtr03060 Protein export 6
mtr04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 2
sly04626 Plant-pathogen interaction 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 7
sly03060 Protein export 6
sly04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 11
sot04145 Phagosome 5
sot03060 Protein export 4
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 3
osa04141 Protein processing in endoplasmic reticulum 3
osa03060 Protein export 3
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
zma04141 Protein processing in endoplasmic reticulum 4
zma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 8
zma03060 Protein export 3
zma04145 Phagosome 3
zma00510 N-Glycan biosynthesis 3
zma00513 Various types of N-glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 8
zma03060 Protein export 4
zma04145 Phagosome 4
zma00510 N-Glycan biosynthesis 4
zma00513 Various types of N-glycan biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 9
hvu03060 Protein export 5
hvu04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04120 Ubiquitin mediated proteolysis 4
sbi03060 Protein export 2
sbi04145 Phagosome 2
sbi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 8
sbi03060 Protein export 3
sbi04145 Phagosome 3
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi03060 Protein export 5
bdi04145 Phagosome 3
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 3
bdi04144 Endocytosis 2
bdi04148 Efferocytosis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
cre03060 Protein export 3
cre04145 Phagosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835114 824017 103873129 103858453 103861513 106347011 111213824 106374443 107937089 107911752 107904824 102612236 100306386 100805604 100789824 7454723 7454559 11446014 11424024 101247903 101243898 102596779 102603715 4328492 100284544 100280916 100192024 123402761 123412002 8079395 8069358 100827752 100832867 5724439
The preparation time of this page was 3.5 [sec].