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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   AGL28   AGAMOUS-like 28 
 ath-m.9   AGL28   AGAMOUS-like 28 
 ath-m.4.hor   AGL28   AGAMOUS-like 28 
 ath-m.4.lig   AGL28   AGAMOUS-like 28 
 ath-m.4.str   AGL28   AGAMOUS-like 28 
 ath-m.4.tis   AGL28   AGAMOUS-like 28 
 bna-r.1   106394164   agamous-like MADS-box protein AGL29 
 ghi-r.1   121216146   uncharacterized LOC121216146 
 ghi-r.1   121216145   agamous-like MADS-box protein AGL61 
 zma-u.5   100194048   uncharacterized LOC100194048 
 zma-u.5   100383076   MADS-box transcription factor family protein 
 bdi-r.1   100838245   agamous-like MADS-box protein AGL62-like 

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Top 50 coexpressed genes to AGL28 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AGL28 (ath-m.4.bio coexpression data)

CoexMap"837142"


athAGL28 | Entrez gene ID : 837142      
Species ath bna ghi zma bdi sbi cre ppo bra mtr tae sly osa cit sot gma nta hvu vvi
Paralog 6 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009911 [list] [network] positive regulation of flower development  (44 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_171660.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  mito 1,  cyto 1,  chlo_mito 1,  mito_plas 1  (predict for NP_171660.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for NP_171660.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
AGL28
ath-m.9
for
AGL28
ath-m.4.hor
for
AGL28
ath-m.4.lig
for
AGL28
ath-m.4.str
for
AGL28
ath-m.4.tis
for
AGL28
bna-r.1
for
106394164
ghi-r.1
for
121216146
ghi-r.1
for
121216145
zma-u.5
for
100194048
zma-u.5
for
100383076
bdi-r.1
for
100838245


Ortholog ID: 69
Species bna osa osa zma zma
Symbol LOC106413582 LOC9268759 LOC107276575 LOC100194048 LOC100282117
Function* agamous-like MADS-box protein AGL61 agamous-like MADS-box protein AGL62 agamous-like MADS-box protein AGL29 uncharacterized LOC100194048 uncharacterized LOC100282117
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 5
bna03008 Ribosome biogenesis in eukaryotes 3
bna00100 Steroid biosynthesis 2
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106413582 9268759 107276575 100194048 100282117
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