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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.bio   PSBP-1   photosystem II subunit P-1 
 ath-u.5   PSBP-1   photosystem II subunit P-1 
 ath-r.7   PSBP-1   photosystem II subunit P-1 
 ath-m.9   PSBP-1   photosystem II subunit P-1 
 ath-e.2   PSBP-1   photosystem II subunit P-1 
 ath-m.4.hor   PSBP-1   photosystem II subunit P-1 
 ath-m.4.lig   PSBP-1   photosystem II subunit P-1 
 ath-m.4.str   PSBP-1   photosystem II subunit P-1 
 ath-m.4.tis   PSBP-1   photosystem II subunit P-1 
 bra-r.6   103844017   oxygen-evolving enhancer protein 2, chloroplastic 
 bra-r.6   103867933   oxygen-evolving enhancer protein 2-1, chloroplastic 
 bra-r.6   103843499   oxygen-evolving enhancer protein 2, chloroplastic 
 bna-r.1   125591419   oxygen-evolving enhancer protein 2, chloroplastic-like 
 bna-r.1   106451406   oxygen-evolving enhancer protein 2-1, chloroplastic 
 bna-r.1   106427061   oxygen-evolving enhancer protein 2, chloroplastic 
 ghi-r.1   107959638   oxygen-evolving enhancer protein 2, chloroplastic 
 ghi-r.1   107896833   oxygen-evolving enhancer protein 2, chloroplastic 
 ghi-r.1   107914520   oxygen-evolving enhancer protein 2, chloroplastic 
 cit-r.1   102625749   oxygen-evolving enhancer protein 2, chloroplastic 
 gma-u.5   100802315   oxygen-evolving enhancer protein 2, chloroplastic 
 gma-u.5   100813388   oxygen-evolving enhancer protein 2, chloroplastic 
 gma-u.5   100784806   oxygen-evolving enhancer protein 2, chloroplastic 
 vvi-u.5   PSBP1   probable oxygen-evolving enhancer protein 2 
 ppo-u.5   7480710   oxygen-evolving enhancer protein 2, chloroplastic 
 ppo-u.5   7464819   oxygen-evolving enhancer protein 2, chloroplastic 
 mtr-u.5   25490561   oxygen-evolving enhancer protein 2, chloroplastic 
 mtr-u.5   11429945   oxygen-evolving enhancer protein 2, chloroplastic 
 sly-u.5   PSBP   photosystem II 23 kDa protein 
 sot-r.1   102603839   oxygen-evolving enhancer protein 2, chloroplastic-like 
 nta-r.1   107810044   oxygen-evolving enhancer protein 2-2, chloroplastic 
 nta-r.1   107769475   oxygen-evolving enhancer protein 2-1, chloroplastic-like 
 nta-r.1   107830202   oxygen-evolving enhancer protein 2-3, chloroplastic 
 osa-u.5   4342370   oxygen-evolving enhancer protein 2, chloroplastic 
 zma-u.5   107648855   Oxygen-evolving enhancer protein 2-1 chloroplastic 
 zma-u.5   100273117   oxygen-evolving enhancer protein 2, chloroplastic 
 tae-r.2   123044987   oxygen-evolving enhancer protein 2, chloroplastic-like 
 tae-r.2   123052884   oxygen-evolving enhancer protein 2, chloroplastic-like 
 tae-r.2   543290   oxygen-evolving enhancer protein 2, chloroplastic-like 
 hvu-r.1   123426291   oxygen-evolving enhancer protein 2, chloroplastic 
 sbi-r.1   8079911   oxygen-evolving enhancer protein 2, chloroplastic 
 bdi-r.1   100827919   oxygen-evolving enhancer protein 2, chloroplastic 
 cre-r.1   CHLRE_12g550850v5   uncharacterized protein 

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Top 50 coexpressed genes to PSBP-1 (ath-m.4.bio coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PSBP-1 (ath-m.4.bio coexpression data)

CoexMap"837178"


athPSBP-1 | Entrez gene ID : 837178      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 1 3 1 2 2 1 1 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00195 [list] [network] Photosynthesis (77 genes)
GO BP
GO:0019684 [list] [network] photosynthesis, light reaction  (105 genes)  TAS  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (17 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (30 genes)  TAS  
GO:0009543 [list] [network] chloroplast thylakoid lumen  (52 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (69 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0048046 [list] [network] apoplast  (340 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA IDA  
GO:0009579 [list] [network] thylakoid  (507 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0008266 [list] [network] poly(U) RNA binding  (19 genes)  IDA  
GO:1901149 [list] [network] salicylic acid binding  (29 genes)  HDA  
GO:0005509 [list] [network] calcium ion binding  (158 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001117239.1 [sequence] [blastp]
NP_172153.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  extr 2,  mito 1,  cyto 1,  vacu 1,  E.R. 1,  cyto_mito 1,  E.R._vacu 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001117239.1)
chlo 7,  mito 3  (predict for NP_172153.1)
Subcellular
localization
TargetP
scret 6,  chlo 3  (predict for NP_001117239.1)
chlo 8  (predict for NP_172153.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.bio
for
PSBP-1
ath-u.5
for
PSBP-1
ath-r.7
for
PSBP-1
ath-m.9
for
PSBP-1
ath-e.2
for
PSBP-1
ath-m.4.hor
for
PSBP-1
ath-m.4.lig
for
PSBP-1
ath-m.4.str
for
PSBP-1
ath-m.4.tis
for
PSBP-1
bra-r.6
for
103844017
bra-r.6
for
103867933
bra-r.6
for
103843499
bna-r.1
for
125591419
bna-r.1
for
106451406
bna-r.1
for
106427061
ghi-r.1
for
107959638
ghi-r.1
for
107896833
ghi-r.1
for
107914520
cit-r.1
for
102625749
gma-u.5
for
100802315
gma-u.5
for
100813388
gma-u.5
for
100784806
vvi-u.5
for
PSBP1
ppo-u.5
for
7480710
ppo-u.5
for
7464819
mtr-u.5
for
25490561
mtr-u.5
for
11429945
sly-u.5
for
PSBP
sot-r.1
for
102603839
nta-r.1
for
107810044
nta-r.1
for
107769475
nta-r.1
for
107830202
osa-u.5
for
4342370
zma-u.5
for
107648855
zma-u.5
for
100273117
tae-r.2
for
123044987
tae-r.2
for
123052884
tae-r.2
for
543290
hvu-r.1
for
123426291
sbi-r.1
for
8079911
bdi-r.1
for
100827919
cre-r.1
for
CHLRE_12g550850v5


Ortholog ID: 4636
Species ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol PSBP-1 LOC103867933 LOC103843499 LOC103836470 LOC106419997 LOC106362222 LOC106374937 LOC107959638 LOC107896833 LOC107914520 LOC102625749 LOC100802315 LOC100813388 LOC100781848 PSBP1 LOC7480710 LOC7464819 LOC25490561 LOC11429945 PSBP LOC102603839 LOC107769475 LOC107830202 LOC107785785 LOC4342370 LOC107648855 LOC100273117 LOC123044987 LOC123052884 LOC543290 LOC123426291 LOC8079911 LOC100827919 CHLRE_12g550850v5
Function* photosystem II subunit P-1 oxygen-evolving enhancer protein 2-1, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2-1, chloroplastic-like oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic-like probable oxygen-evolving enhancer protein 2 oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic photosystem II 23 kDa protein oxygen-evolving enhancer protein 2, chloroplastic-like oxygen-evolving enhancer protein 2-1, chloroplastic-like oxygen-evolving enhancer protein 2-3, chloroplastic oxygen-evolving enhancer protein 2-1, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic Oxygen-evolving enhancer protein 2-1 chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic-like oxygen-evolving enhancer protein 2, chloroplastic-like oxygen-evolving enhancer protein 2, chloroplastic-like oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic oxygen-evolving enhancer protein 2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 4
bra01200 Carbon metabolism 3
bra00196 Photosynthesis - antenna proteins 3
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 13
bra00196 Photosynthesis - antenna proteins 5
bra00710 Carbon fixation by Calvin cycle 2
bra01200 Carbon metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 12
bra00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 9
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
bna00010 Glycolysis / Gluconeogenesis 2
bna00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00710 Carbon fixation by Calvin cycle 7
ghi00195 Photosynthesis 6
ghi00630 Glyoxylate and dicarboxylate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00195 Photosynthesis 5
ghi00710 Carbon fixation by Calvin cycle 5
ghi00630 Glyoxylate and dicarboxylate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00195 Photosynthesis 5
ghi00710 Carbon fixation by Calvin cycle 5
ghi00630 Glyoxylate and dicarboxylate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 13
gma00196 Photosynthesis - antenna proteins 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 7
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
gma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 10
vvi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 13
ppo00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 11
mtr00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 10
mtr00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 9
sly01200 Carbon metabolism 2
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 11
nta00196 Photosynthesis - antenna proteins 4
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 10
nta00906 Carotenoid biosynthesis 2
nta00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 13
osa00630 Glyoxylate and dicarboxylate metabolism 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 13
zma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00196 Photosynthesis - antenna proteins 11
zma00195 Photosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00195 Photosynthesis 10
hvu00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 10
sbi00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 7
cre00196 Photosynthesis - antenna proteins 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837178 103867933 103843499 103836470 106419997 106362222 106374937 107959638 107896833 107914520 102625749 100802315 100813388 100781848 100262649 7480710 7464819 25490561 11429945 544077 102603839 107769475 107830202 107785785 4342370 107648855 100273117 123044987 123052884 543290 123426291 8079911 100827919 5719659
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